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对U7小核仁RNA基因进行工程改造以重新构建转录本。

Engineering U7snRNA gene to reframe transcripts.

作者信息

Goyenvalle Aurélie

机构信息

MRC Functional Genomics Unit, Department of Physiology, Anatomy & Genetics, University of Oxford, Oxford, UK.

出版信息

Methods Mol Biol. 2012;867:259-71. doi: 10.1007/978-1-61779-767-5_17.

DOI:10.1007/978-1-61779-767-5_17
PMID:22454067
Abstract

Antisense-mediated splicing modulation of premessenger RNA represents a novel therapeutic strategy for several types of pathologies such as genetic disorders, cancers, and infectious diseases. Antisense oligonucleotides designed to bind to specific mRNA molecules have been actively developed for more than 20 years as a form of molecular medicine to modulate splicing patterns or inhibit protein translation. More recently, small nuclear RNA such as U7 or U1 small nuclear RNA have been used to carry antisense sequences, offering the advantage of long-term effect when delivered to cells using viral vectors. We have previously demonstrated the therapeutic potential of U7snRNA targeting dystrophin mRNA as a treatment for Duchenne muscular dystrophy. In particular, we showed that bifunctional U7 snRNAs harboring silencer motifs induce complete skipping of exon 51, and thus restore dystrophin expression in DMD patients cells to near wild-type levels. These new constructs are very promising for the optimization of therapeutic exon skipping for DMD, but also offer powerful and versatile tools to modulate pre-mRNA splicing in a wide range of applications. Here, we outline the design of these U7snRNA constructs to achieve efficient exon-skipping and describe methods to evaluate the efficacy of such U7snRNA constructs in vitro using the dystrophin gene as an example.

摘要

反义介导的前体信使核糖核酸剪接调控代表了一种针对多种类型疾病(如遗传疾病、癌症和传染病)的新型治疗策略。作为一种分子医学形式,旨在与特定信使核糖核酸分子结合的反义寡核苷酸已被积极研发超过20年,用于调控剪接模式或抑制蛋白质翻译。最近,诸如U7或U1小核核糖核酸等小核核糖核酸已被用于携带反义序列,当使用病毒载体递送至细胞时具有长期效应的优势。我们之前已证明靶向抗肌萎缩蛋白信使核糖核酸的U7小核核糖核酸作为杜氏肌营养不良症治疗方法的治疗潜力。具体而言,我们表明携带沉默子基序的双功能U7小核核糖核酸可诱导外显子51完全跳跃,从而将杜氏肌营养不良症患者细胞中的抗肌萎缩蛋白表达恢复至接近野生型水平。这些新构建体对于优化杜氏肌营养不良症的治疗性外显子跳跃非常有前景,而且还为在广泛应用中调控前体信使核糖核酸剪接提供了强大且通用的工具。在此,我们概述这些U7小核核糖核酸构建体的设计以实现高效外显子跳跃,并描述以抗肌萎缩蛋白基因为例在体外评估此类U7小核核糖核酸构建体功效的方法。

相似文献

1
Engineering U7snRNA gene to reframe transcripts.对U7小核仁RNA基因进行工程改造以重新构建转录本。
Methods Mol Biol. 2012;867:259-71. doi: 10.1007/978-1-61779-767-5_17.
2
Engineering exon-skipping vectors expressing U7 snRNA constructs for Duchenne muscular dystrophy gene therapy.构建用于杜氏肌营养不良基因治疗的表达U7小核RNA构建体的外显子跳跃载体。
Methods Mol Biol. 2011;709:179-96. doi: 10.1007/978-1-61737-982-6_11.
3
U1 snRNA as an effective vector for stable expression of antisense molecules and for the inhibition of the splicing reaction.U1小核RNA作为反义分子稳定表达及剪接反应抑制的有效载体。
Methods Mol Biol. 2012;867:239-57. doi: 10.1007/978-1-61779-767-5_16.
4
Enhanced exon-skipping induced by U7 snRNA carrying a splicing silencer sequence: Promising tool for DMD therapy.携带剪接沉默子序列的U7小核RNA诱导增强的外显子跳跃:杜氏肌营养不良症治疗的有前景工具。
Mol Ther. 2009 Jul;17(7):1234-40. doi: 10.1038/mt.2009.113. Epub 2009 May 19.
5
Engineering multiple U7snRNA constructs to induce single and multiexon-skipping for Duchenne muscular dystrophy.设计多种 U7snRNA 构建体诱导杜氏肌营养不良症的单exon 跳跃和多exon 跳跃。
Mol Ther. 2012 Jun;20(6):1212-21. doi: 10.1038/mt.2012.26. Epub 2012 Feb 21.
6
Splicing intervention for Duchenne muscular dystrophy.杜氏肌营养不良症的剪接干预
Curr Opin Pharmacol. 2005 Oct;5(5):529-34. doi: 10.1016/j.coph.2005.06.001.
7
Bioinformatic and functional optimization of antisense phosphorodiamidate morpholino oligomers (PMOs) for therapeutic modulation of RNA splicing in muscle.用于肌肉中RNA剪接治疗性调控的反义磷酰胺吗啉代寡聚物(PMO)的生物信息学和功能优化
Methods Mol Biol. 2011;709:153-78. doi: 10.1007/978-1-61737-982-6_10.
8
Rescue of dystrophic muscle through U7 snRNA-mediated exon skipping.通过U7小核RNA介导的外显子跳跃挽救营养不良性肌肉。
Science. 2004 Dec 3;306(5702):1796-9. doi: 10.1126/science.1104297. Epub 2004 Nov 4.
9
Antisense-induced exon skipping for duplications in Duchenne muscular dystrophy.反义诱导外显子跳跃治疗杜氏肌营养不良症中的重复突变
BMC Med Genet. 2007 Jul 5;8:43. doi: 10.1186/1471-2350-8-43.
10
Antisense oligonucleotide-induced exon skipping restores dystrophin expression in vitro in a canine model of DMD.在杜氏肌营养不良症(DMD)犬模型中,反义寡核苷酸诱导的外显子跳跃可在体外恢复肌营养不良蛋白的表达。
Gene Ther. 2006 Oct;13(19):1373-81. doi: 10.1038/sj.gt.3302800. Epub 2006 May 25.

引用本文的文献

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Proof-of-concept for multiple AON delivery by a single U7snRNA vector to restore splicing defects in ABCA4.通过单一U7snRNA载体进行多次反义寡核苷酸递送以恢复ABCA4剪接缺陷的概念验证。
Mol Ther. 2024 Mar 6;32(3):837-851. doi: 10.1016/j.ymthe.2024.01.019. Epub 2024 Jan 18.
2
U7 snRNA: A tool for gene therapy.U7 snRNA:基因治疗的工具。
J Gene Med. 2021 Apr;23(4):e3321. doi: 10.1002/jgm.3321. Epub 2021 Feb 23.
3
Alternative splicing of clathrin heavy chain contributes to the switch from coated pits to plaques.网格蛋白重链的可变剪接有助于从有被小窝向有被斑的转变。
J Cell Biol. 2020 Sep 7;219(9). doi: 10.1083/jcb.201912061.
4
Double-target Antisense U1snRNAs Correct Mis-splicing Due to c.639+861C>T and c.639+919G>A GLA Deep Intronic Mutations.双靶点反义U1snRNAs纠正由c.639+861C>T和c.639+919G>A GLA基因内含子深处突变导致的错误剪接。
Mol Ther Nucleic Acids. 2016 Oct 25;5(10):e380. doi: 10.1038/mtna.2016.88.
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Antisense-mediated exon skipping: a therapeutic strategy for titin-based dilated cardiomyopathy.反义介导的外显子跳跃:一种针对基于肌联蛋白的扩张型心肌病的治疗策略。
EMBO Mol Med. 2015 May;7(5):562-76. doi: 10.15252/emmm.201505047.