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在暴露于高金属水平下的海洋多毛类动物(环节动物门)中,转录组和蛋白质组发生了改变。

The transcriptome and proteome are altered in marine polychaetes (Annelida) exposed to elevated metal levels.

机构信息

Charles Darwin University, Darwin, NT 0909, Australia.

出版信息

J Proteomics. 2012 May 17;75(9):2721-35. doi: 10.1016/j.jprot.2012.03.031. Epub 2012 Mar 29.

Abstract

Polychaetes are often used in toxicological studies to understand mechanisms of resistance and for biomarker detection, however, we know of only a few genetic pathways involved in resistance. We found the marine polychaete Ophelina sp.1 (Opheliidae) in sediment containing high copper levels and investigated this phenomenon by measuring metal accumulation in the worms and changes in gene and protein expression. We sequenced the transcriptome of Ophelina sp.1 from both the impacted and reference sediments using 454-sequencing and analysed their proteomes using differential in gel electrophoresis (DIGE). We used the sequenced transcriptome to guide protein identification. Transcripts coding for the copper chaperone, Atox1, were up-regulated in the worms inhabiting the high copper sediment. In addition, genes coding for respiratory proteins, detoxification proteins and cytoskeletal proteins were significantly altered in metal-exposed worms; many of these changes were also detected in the proteome. This dual approach has provided a better understanding of heavy metal resistance in polychaetes and we now have a wider range of suitable indicator genes and proteins for future biomarker development.

摘要

多毛类动物通常被用于毒理学研究,以了解抗性机制和生物标志物检测,然而,我们只了解少数与抗性相关的遗传途径。我们在含有高铜水平的沉积物中发现了海洋多毛类动物 Ophelina sp.1(Opheliidae),并通过测量蠕虫体内的金属积累和基因及蛋白质表达的变化来研究这一现象。我们使用 454 测序对来自受影响和对照沉积物的 Ophelina sp.1 进行了转录组测序,并使用差异凝胶电泳(DIGE)分析了它们的蛋白质组。我们使用测序的转录组来指导蛋白质鉴定。在栖息在高铜沉积物中的蠕虫中,编码铜伴侣蛋白 Atox1 的转录本上调。此外,暴露于金属的蠕虫中呼吸蛋白、解毒蛋白和细胞骨架蛋白的编码基因发生了显著改变;蛋白质组中也检测到了许多这些变化。这种双重方法使我们更好地了解了多毛类动物对重金属的抗性,并且现在我们有了更广泛的合适的指示基因和蛋白质,可用于未来的生物标志物开发。

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