大西洋鲑鱼微小RNA数据库（Ssa miRNAs DB）：大西洋鲑鱼中通过计算机预测的微小RNA的在线存储库。

Ssa miRNAs DB: Online repository of in silico predicted miRNAs in Salmo salar.

作者信息

Reyes Daniela, Cepeda Victoria, González Ruth, Vidal Rodrigo

机构信息

Laboratory of Molecular Ecology, Genomics and Evolutionary Studies, Department of Biology, Faculty of Chemistry and Biology, Santiago de Chile University, Chile & Centro de Biotecnología Acuícola (CBA).

出版信息

Bioinformation. 2012;8(6):284-6. doi: 10.6026/97320630008284. Epub 2012 Mar 31.

DOI:10.6026/97320630008284

PMID:22493538

原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3321240/

Abstract

UNLABELLED

The Atlantic salmon (Salmo salar) is a very valuable commercial salmonid species. As with other aquaculture species, intensive aquaculture of Atlantic salmon often faces disease problems especially in early life stages which can limit stable production of the species. 'Ssa miRNAs DB', a bioinformatics and manually curated database, aims at providing a comprehensive resource of microRNA in Altantic salmon, with a user friendly interface for a convenient retrieval of each entry by microRNA ID or target gene. The current version of Ssa miRNAs DB involved the prediction of 41 and 266 homologous and novel microRNAs, respectively.

AVAILABILITY

The database is available for free at http://www.molgenv.com/ssa_mirnas_db_home.php.

摘要

未标注

大西洋鲑（Salmo salar）是一种非常有价值的商业鲑科鱼类。与其他水产养殖物种一样，大西洋鲑的集约化养殖经常面临疾病问题，尤其是在幼鱼阶段，这可能会限制该物种的稳定生产。“Ssa miRNAs DB”是一个经过生物信息学分析和人工整理的数据库，旨在提供大西洋鲑中微小RNA的综合资源，并具有用户友好的界面，便于通过微小RNA ID或靶基因方便地检索每个条目。Ssa miRNAs DB的当前版本分别涉及41个同源微小RNA和266个新微小RNA的预测。