• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于分子拓扑学开发结构信息以模拟化学和生物学性质:献给勒蒙特·伯韦尔·基尔80岁生日的颂词。

Development of structure information from molecular topology for modeling chemical and biological properties: a tribute to the creativity of Lemont Burwell Kier on his 80th Birthday.

作者信息

Hall Lowell H

机构信息

Department of Chemistry, Eastern Nazarene College, 23 E. Elm Avenue, Quincy, MA 02170, USA.

出版信息

Curr Comput Aided Drug Des. 2012 Jun;8(2):93-106. doi: 10.2174/157340912800492393.

DOI:10.2174/157340912800492393
PMID:22497468
Abstract

This review is a salute to Monty Kier's creativity. Emphasis is placed on creative aspects in the development of the representation of molecular topological structure information and the resultant formalisms: molecular connectivity and electrotopological state (E-State). Less attention is given to detailed analysis of individual papers and the generally well known books and book chapters. This discussion reveals creative paths that led to the concept of the atomic descriptors, simple connectivity delta, encoding local topology, and valence delta value which encodes valence electron information. The fundamental developments that led to the creation of molecular connectivity chi indices are described along with extensions to different chi and delta chi formalisms. Continued thinking about structure in the topological sense led to the development of the only valence state electronegativity formalism based entirely on structure, Kier-Hall electronegativity (KHE). That creation further inspired the development of the electronegativity/topology-based atomic intrinsic state along with perturbation terms that together give electrotopological state indices (E-State). Further creation led to atom and bond type E-State descriptors. All these developments are briefly illustrated with examples in QSAR, chemical similarity, and database searching.

摘要

本综述是对蒙蒂·基尔创造力的致敬。重点在于分子拓扑结构信息表示及由此产生的形式体系(分子连接性和电子拓扑状态,即E态)发展过程中的创造性方面。对个别论文以及广为人知的书籍和章节的详细分析关注较少。本讨论揭示了通向原子描述符概念、编码局部拓扑的简单连接性δ、编码价电子信息的价δ值的创造性路径。描述了导致分子连接性χ指数创建的基础发展,以及对不同χ和δχ形式体系的扩展。从拓扑意义上对结构的持续思考导致了唯一完全基于结构的价态电负性形式体系——基尔 - 霍尔电负性(KHE)的发展。这一成果进一步激发了基于电负性/拓扑的原子固有状态以及微扰项的发展,二者共同给出电子拓扑状态指数(E态)。进一步的创新产生了原子和键型E态描述符。所有这些发展都通过定量构效关系、化学相似性和数据库搜索方面的例子进行了简要说明。

相似文献

1
Development of structure information from molecular topology for modeling chemical and biological properties: a tribute to the creativity of Lemont Burwell Kier on his 80th Birthday.基于分子拓扑学开发结构信息以模拟化学和生物学性质:献给勒蒙特·伯韦尔·基尔80岁生日的颂词。
Curr Comput Aided Drug Des. 2012 Jun;8(2):93-106. doi: 10.2174/157340912800492393.
2
Electrotopological state atom (E-state) index in drug design, QSAR, property prediction and toxicity assessment.药物设计、定量构效关系、性质预测及毒性评估中的电子拓扑状态原子(E态)指数。
Curr Comput Aided Drug Des. 2012 Jun;8(2):135-58. doi: 10.2174/157340912800492366.
3
A structure-information approach to the prediction of biological activities and properties.
Chem Biodivers. 2004 Jan;1(1):183-201. doi: 10.1002/cbdv.200490010.
4
QSAR modeling based on structure-information for properties of interest in human health.
SAR QSAR Environ Res. 2005 Feb-Apr;16(1-2):13-41. doi: 10.1080/10629360412331319853.
5
Importance of Kier-Hall topological indices in the QSAR of anticancer drug design.基尔-霍尔拓扑指数在抗癌药物设计定量构效关系中的重要性。
Curr Comput Aided Drug Des. 2012 Jun;8(2):159-70. doi: 10.2174/157340912800492384.
6
Chemical graphs, molecular matrices and topological indices in chemoinformatics and quantitative structure-activity relationships.化学信息学与定量构效关系中的化学图、分子矩阵和拓扑指数
Curr Comput Aided Drug Des. 2013 Jun;9(2):153-63. doi: 10.2174/1573409911309020002.
7
Novel atomic-level-based AI topological descriptors: application to QSPR/QSAR modeling.基于原子水平的新型人工智能拓扑描述符:在定量构效关系/定量结构活性关系建模中的应用。
J Chem Inf Comput Sci. 2002 Jul-Aug;42(4):858-68. doi: 10.1021/ci020362l.
8
Issues in representation of molecular structure the development of molecular connectivity.分子结构表示中的问题——分子连接性的发展
J Mol Graph Model. 2001;20(1):4-18. doi: 10.1016/s1093-3263(01)00097-3.
9
Performance of Kier-Hall E-state descriptors in quantitative structure activity relationship (QSAR) studies of multifunctional molecules.Kier-Hall E态描述符在多功能分子定量构效关系(QSAR)研究中的性能
Molecules. 2004 Dec 31;9(12):1004-9. doi: 10.3390/91201004.
10
Prediction of plasma protein binding of drugs using Kier-Hall valence connectivity indices and 4D-fingerprint molecular similarity analyses.
J Comput Aided Mol Des. 2005 Aug;19(8):567-83. doi: 10.1007/s10822-005-9012-4. Epub 2005 Nov 3.

引用本文的文献

1
Two new atom centered fragment descriptors and scoring function enhance classification of antibacterial activity.两种新的以原子为中心的片段描述符和评分函数增强了抗菌活性的分类。
J Mol Model. 2014 Apr;20(4):2164. doi: 10.1007/s00894-014-2164-1. Epub 2014 Mar 25.