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先天性副肌强直:从临床诊断到计算机蛋白质建模分析

Paramyotonia congenita: from clinical diagnosis to in silico protein modeling analysis.

作者信息

Nurputra Dian K, Nakagawa Taku, Takeshima Yasuhiro, Harahap Indra S K, Morikawa Satoru, Sakaeda Toshiyuki, Lai Poh San, Matsuo Masafumi, Takaoka Yutaka, Nishio Hisahide

机构信息

Department of Community Medicine and Social Health Care, Kobe University Graduate School of Medicine, 7-5-1 Kusunoki-Cho, Chuo-Ku, Kobe 650-0017, Japan.

出版信息

Pediatr Int. 2012 Oct;54(5):602-12. doi: 10.1111/j.1442-200X.2012.03646.x. Epub 2012 Jul 10.

Abstract

BACKGROUND

Paramyotonia congenita (PMC) is an autosomal dominant disorder characterized by cold- or exercise-induced myotonia. PMC is caused by a mutation in SCN4A which encodes the α-subunit of the skeletal muscle sodium channel.

METHODS

The patient was an 11-year-old Japanese girl who was diagnosed as having PMC. To confirm the diagnosis, an orbital ice-pack test and blinking tests were performed. Next, to identify the mutation, genetic analysis of SCN4A was performed. Finally, to evaluate the mutation effect on the protein structure, in silico protein modeling analysis was performed.

RESULTS

Cold- and exercise-induced myotonia was reproduced in the patient with non-invasive bedside tests: ice-pack and blinking tests. In the genetic analysis, a missense mutation, c.4343G>A in SCN4A, was identified, which may result in an arginine to histidine substitution at 1448 in the protein sequence (p.Arg1448His). According to the protein modeling analysis, the mutation neutralized the positive electrostatic charge at 1448 in the DIV/S4 segment and disrupted the beginning of the helical structure in the DIV/S3-S4 linker of the SCN4A protein.

CONCLUSIONS

Diagnostic physical interventions in the patient confirmed the phenotype presentation consistent with PMC, and the in silico protein modeling analysis of p.Arg1448His predicted structural changes which can affect function of the protein. All the data confirmed the diagnosis of PMC in the patient and added to existing literature emphasizing the important role of arginine residue at 1448.

摘要

背景

先天性副肌强直(PMC)是一种常染色体显性疾病,其特征为寒冷或运动诱发的肌强直。PMC 由编码骨骼肌钠通道α亚基的 SCN4A 基因突变引起。

方法

该患者为一名 11 岁日本女孩,被诊断为 PMC。为确诊,进行了眼眶冰敷试验和眨眼试验。接下来,为鉴定突变,对 SCN4A 进行了基因分析。最后,为评估该突变对蛋白质结构的影响,进行了计算机蛋白质建模分析。

结果

通过非侵入性床边试验(冰敷和眨眼试验)在患者身上再现了寒冷和运动诱发的肌强直。在基因分析中,鉴定出 SCN4A 中的一个错义突变 c.4343G>A,这可能导致蛋白质序列中第 1448 位的精氨酸被组氨酸取代(p.Arg1448His)。根据蛋白质建模分析,该突变中和了 DIV/S4 区段第 1448 位的正电荷,并破坏了 SCN4A 蛋白 DIV/S3 - S4 连接区螺旋结构的起始部分。

结论

对患者的诊断性体格检查干预证实了与 PMC 一致的表型表现,并且对 p.Arg1448His 的计算机蛋白质建模分析预测了可能影响蛋白质功能的结构变化。所有数据均证实了该患者的 PMC 诊断,并补充了现有文献,强调了第 1448 位精氨酸残基的重要作用。

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