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生物信息学证据表明,从蓝藻到甲藻的微生物似氨基酸核心(4-去甲黄质)合成基因的转移,以及在可变鱼腥藻 PCC 7937 中突变相同基因(YP_324358)的尝试。

Bioinformatics evidence for the transfer of mycosporine-like amino acid core (4-deoxygadusol) synthesizing gene from cyanobacteria to dinoflagellates and an attempt to mutate the same gene (YP_324358) in Anabaena variabilis PCC 7937.

机构信息

Department of Biology, Friedrich-Alexander University Erlangen-Nuremberg, Staudtstrasse 5, D-91058 Erlangen, Germany.

出版信息

Gene. 2012 Jun 1;500(2):155-63. doi: 10.1016/j.gene.2012.03.063. Epub 2012 Apr 5.

Abstract

We have identified a homologue of 4-deoxygadusol (core of mycosporine-like amino acids) synthesizing gene (ZP_05036788) from Synechococcus sp. PCC 7335 that was found to have additional functionally unknown N-terminal domain similar to homologues from dinoflagellates based on the ClustalW analysis. Phylogenetic analysis revealed that Synechococcus sp. (ZP_05036788) makes a clade together with dinoflagellates and was closest to the Oxyrrhis marina. This study shows for the first time that N-terminal additional sequences that possess upstream plastid targeting sequence in Heterocapsa triquetra and Karlodinium micrum were already evolved in cyanobacteria, and plastid targeting sequence were evolved later in dinoflagellates after divergence from chloroplast lacking Oxyrrhis marina. Thus, MAAs synthesizing genes were transferred from cyanobacteria to dinoflagellates and possibly Synechococcus sp. PCC 7335 acted as a donor during lateral gene transfer event. In addition, we also tried to mutate 4-deoxygadusol synthesizing gene (YP_324358) of Anabaena variabilis PCC 7937 by homologous recombination, however, all approaches to get complete segregation of the mutants from the wild-type were unsuccessful, showing the essentiality of YP_324358 for A. variabilis PCC 7937.

摘要

我们从聚球藻 PCC 7335 中鉴定出一种 4-脱羟谷氨酸(菌绿素类似氨基酸的核心)合成基因(ZP_05036788),该基因具有额外的、功能未知的 N 端结构域,与基于 ClustalW 分析的甲藻同源物相似。系统发育分析表明,聚球藻(ZP_05036788)与甲藻形成一个分支,与海洋卵形藻最为接近。这项研究首次表明,在三角褐指藻和微小亚历山大藻中,具有上游质体靶向序列的 N 端额外序列已经在蓝藻中进化,并且在与缺乏海洋卵形藻的叶绿体分化后,质体靶向序列在甲藻中进一步进化。因此,MAAs 合成基因从蓝藻转移到甲藻,并且可能在侧向基因转移事件中,聚球藻 PCC 7335 充当了供体。此外,我们还试图通过同源重组突变鱼腥藻 PCC 7937 的 4-脱羟谷氨酸合成基因(YP_324358),然而,所有使突变体从野生型完全分离的方法都没有成功,表明 YP_324358 对鱼腥藻 PCC 7937 是必需的。

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