Research Institute for Experimental Medicine, Saint-Petersburg, Russia.
Prog Biophys Mol Biol. 2012 Sep;110(1):87-96. doi: 10.1016/j.pbiomolbio.2012.05.002. Epub 2012 May 16.
Clonal cells are known to display stochastically varying interdivision times (IMT) and stochastic choices of cell fates. These features are suggested in the present paper to stem from discrete transitions of genes between different modes of their engagement in transcription. These transitions are explained by stochastic events of assembly/disassembly of huge ensembles of transcription factors needed to built-up gene-specific transcription preinitiation complexes (PIC). The time required to assemble a PIC at a gene promoter by random collisions of numerous proteins may be long enough to be comparable with the cell cycle. Independently published findings are reviewed to show that active genes may display discontinuous patterns of transcriptional output consistent with stochastically varying periods of PIC presence or absence at their promoters, and that these periods may reach several hours. This timescale matches the time needed for synchronised clonal cells to pass the restriction point (RP) of the cell cycle. RP is suggested to correspond to cell state where cell fate is determined by competing discrete transcriptional events. Cell fate choice depends on the event that, by chance, has outpaced other events able to commit the cell to alternative fates. Simple modelling based on these premises is consistent with general features of cell kinetics, including RP passage dependance on mitogenic stimulation, IMT distributions conformance to exponentially modified Gaussian, the limited proliferative potential of untransformed cells, relationships between changes in cell proliferation and differentiation, and bimodal distributions of cells over expression levels of genes involved in stem cell differentiation.
克隆细胞被认为表现出随机变化的分裂时间(IMT)和细胞命运的随机选择。本文提出这些特征源于基因在转录参与的不同模式之间的离散转换。这些转换是由组装/拆卸构建基因特异性转录起始复合物(PIC)所需的大量转录因子的随机事件解释的。通过许多蛋白质的随机碰撞在基因启动子处组装 PIC 所需的时间可能足够长,足以与细胞周期相媲美。独立发表的研究结果表明,活跃的基因可能显示出不连续的转录输出模式,与 PIC 在其启动子处存在或不存在的随机变化时期一致,这些时期可能达到数小时。这个时间尺度与同步克隆细胞通过细胞周期的限制点(RP)所需的时间相匹配。RP 被认为对应于细胞命运由竞争离散转录事件决定的细胞状态。细胞命运的选择取决于偶然发生的事件,该事件超过了能够使细胞走向替代命运的其他事件。基于这些前提的简单建模与细胞动力学的一般特征一致,包括 RP 通过有丝分裂刺激的依赖性、IMT 分布符合指数修正高斯分布、未转化细胞的有限增殖潜力、细胞增殖和分化变化之间的关系,以及参与干细胞分化的基因的细胞表达水平的双峰分布。