Complex Carbohydrate Research Center, University of Georgia, Athens, GA 30602, USA.
Glycoconj J. 2013 Jan;30(1):33-40. doi: 10.1007/s10719-012-9390-5. Epub 2012 May 26.
Zebrafish (Danio rerio) remains a versatile model organism for the investigation of early development and organogenesis, and has emerged as a valuable platform for drug discovery and toxicity evaluation [1-6]. Harnessing the genetic power and experimental accessibility of this system, three decades of research have identified key genes and pathways that control the development of multiple organ systems and tissues, including the heart, kidney, and craniofacial cartilage, as well as the hematopoietic, vascular, and central and peripheral nervous systems [7-31]. In addition to their application in large mutagenic screens, zebrafish has been used to model a variety of diseases such as diabetes, polycystic kidney disease, muscular dystrophy and cancer [32-36]. As this work continues to intersect with cellular pathways and processes such as lipid metabolism, glycosylation and vesicle trafficking, investigators are often faced with the challenge of determining the degree to which these pathways are functionally conserved in zebrafish. While they share a high degree of genetic homology with mouse and human, the manner in which cellular pathways are regulated in zebrafish during early development, and the differences in the organ physiology, warrant consideration before functional studies can be effectively interpreted and compared with other vertebrate systems. This point is particularly relevant for glycosylation since an understanding of the glycan diversity and the mechanisms that control glycan biosynthesis during zebrafish embryogenesis (as in many organisms) is still developing.Nonetheless, a growing number of studies in zebrafish have begun to cast light on the functional roles of specific classes of glycans during organ and tissue development. While many of the initial efforts involved characterizing identified mutants in a number of glycosylation pathways, the use of reverse genetic approaches to directly model glycosylation-related disorders is now increasingly popular. In this review, the glycomics of zebrafish and the developmental expression of their glycans will be briefly summarized along with recent chemical biology approaches to visualize certain classes of glycans within developing embryos. Work regarding the role of protein-bound glycans and glycosaminoglycans (GAG) in zebrafish development and organogenesis will also be highlighted. Lastly, future opportunities and challenges in the expanding field of zebrafish glycobiology are discussed.
斑马鱼(Danio rerio)仍然是研究早期发育和器官发生的多功能模式生物,并且已经成为药物发现和毒性评估的有价值平台[1-6]。利用该系统的遗传力量和实验可及性,三十年来的研究已经确定了控制多个器官系统和组织发育的关键基因和途径,包括心脏、肾脏和颅面软骨,以及造血、血管和中枢及外周神经系统[7-31]。除了在大型诱变筛选中的应用外,斑马鱼还被用于模拟多种疾病,如糖尿病、多囊肾病、肌肉营养不良和癌症[32-36]。随着这项工作继续与脂质代谢、糖基化和囊泡运输等细胞途径和过程交叉,研究人员经常面临确定这些途径在斑马鱼中功能保守程度的挑战。尽管它们与小鼠和人类具有高度的遗传同源性,但在早期发育过程中,细胞途径在斑马鱼中的调控方式以及器官生理学的差异,在功能研究能够得到有效解释并与其他脊椎动物系统进行比较之前,需要加以考虑。这一点对于糖基化尤为重要,因为对于糖生物合成过程中糖的多样性和控制糖生物合成的机制的理解(在许多生物体中)仍在发展中。尽管如此,越来越多的斑马鱼研究开始揭示特定类别的聚糖在器官和组织发育中的功能作用。虽然最初的许多努力都涉及到对一些糖基化途径中的已鉴定突变体进行特征描述,但现在越来越多地使用反向遗传学方法直接模拟与糖基化相关的疾病。在这篇综述中,将简要总结斑马鱼的糖组学及其聚糖的发育表达,以及在发育胚胎中可视化某些类别的聚糖的最新化学生物学方法。关于蛋白质结合聚糖和糖胺聚糖(GAG)在斑马鱼发育和器官发生中的作用的工作也将被强调。最后,讨论了在不断扩展的斑马鱼糖生物学领域中的未来机会和挑战。