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衔接蛋白 2 PH 结构域的晶体结构揭示了其膜锚定的构象转变及其对整合素激活的调节。

Crystal structure of kindlin-2 PH domain reveals a conformational transition for its membrane anchoring and regulation of integrin activation.

机构信息

National Laboratory of Biophysics, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.

出版信息

Protein Cell. 2012 Jun;3(6):434-40. doi: 10.1007/s13238-012-2046-1. Epub 2012 May 31.

DOI:10.1007/s13238-012-2046-1
PMID:22653426
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4875484/
Abstract

Kindlin-2 belongs to a subfamily of FERM domain containing proteins, which plays key roles in activating integrin transmembrane receptors and mediating cell adhesion. Compared to conventional FERM domains, kindlin-2 FERM contains an inserted pleckstrin homology (PH) domain that specifically binds to phosphatidylinositol (3,4,5) trisphosphate (PIP3) and regulates the kindlin-2 function. We have determined the crystal structure of kindlin-2 PH domain at 1.9 Å resolution, which reveals a conserved PH domain fold with a highly charged and open binding pocket for PIP3 head group. Structural comparison with a previously reported solution structure of kindlin-2 PH domain bound to PIP3 head group reveals that upon PIP3 insertion, there is a significant conformational change of both the highly positively charged loop at the entry of the PIP3 binding pocket and the entire β barrel of the PH domain. We propose that such "induced-fit" type change is crucial for the tight binding of PIP3 to anchor kindlin-2 onto the membrane surface, thereby promoting its binding to integrins. Our results provide important structural insight into kindlin-2-mediated membrane anchoring and integrin activation.

摘要

Kindlin-2 属于 FERM 结构域蛋白的一个亚家族,在激活整合素跨膜受体和介导细胞黏附中发挥关键作用。与传统的 FERM 结构域相比,Kindlin-2 的 FERM 结构域含有一个插入的 pleckstrin 同源(PH)结构域,该结构域特异性结合磷脂酰肌醇(3,4,5)三磷酸(PIP3)并调节 Kindlin-2 的功能。我们已经确定了 Kindlin-2 PH 结构域的晶体结构,分辨率为 1.9Å,揭示了一个保守的 PH 结构域折叠,具有带高电荷的开放 PIP3 头部结合口袋。与之前报道的与 PIP3 头部结合的 Kindlin-2 PH 结构域的溶液结构的结构比较表明,在 PIP3 插入后,高度带正电荷的 PIP3 结合口袋入口处的环和 PH 结构域的整个β桶都发生了显著的构象变化。我们提出,这种“诱导契合”类型的变化对于 PIP3 与锚定 Kindlin-2 到膜表面的紧密结合至关重要,从而促进其与整合素的结合。我们的结果为 Kindlin-2 介导的膜锚定和整合素激活提供了重要的结构见解。

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Crystal structure of kindlin-2 PH domain reveals a conformational transition for its membrane anchoring and regulation of integrin activation.衔接蛋白 2 PH 结构域的晶体结构揭示了其膜锚定的构象转变及其对整合素激活的调节。
Protein Cell. 2012 Jun;3(6):434-40. doi: 10.1007/s13238-012-2046-1. Epub 2012 May 31.
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本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
Integrin signalling and function in immune cells.整合素信号转导及其在免疫细胞中的功能。
Immunology. 2012 Apr;135(4):268-75. doi: 10.1111/j.1365-2567.2011.03549.x.
3
Membrane binding of the N-terminal ubiquitin-like domain of kindlin-2 is crucial for its regulation of integrin activation.连接蛋白-2 的 N 端泛素样结构域与膜的结合对于其调控整合素激活至关重要。
Structure. 2011 Nov 9;19(11):1664-71. doi: 10.1016/j.str.2011.08.012.
4
Structural basis of phosphoinositide binding to kindlin-2 protein pleckstrin homology domain in regulating integrin activation.结构基础磷酸肌醇结合到调节整合素激活的韧粘蛋白-2 蛋白 pleckstrin 同源结构域。
J Biol Chem. 2011 Dec 16;286(50):43334-42. doi: 10.1074/jbc.M111.295352. Epub 2011 Oct 26.
5
Crystallization and preliminary X-ray crystallographic analysis of the human kindlin-2 PH domain.人类踝蛋白-2 PH结构域的结晶及初步X射线晶体学分析
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Jun 1;67(Pt 6):696-9. doi: 10.1107/S1744309111013820. Epub 2011 May 26.
6
Kindlin-2 regulates podocyte adhesion and fibronectin matrix deposition through interactions with phosphoinositides and integrins.Kindlin-2 通过与磷酸肌醇和整合素相互作用调节足细胞黏附和纤维连接蛋白基质沉积。
J Cell Sci. 2011 Mar 15;124(Pt 6):879-91. doi: 10.1242/jcs.076976. Epub 2011 Feb 15.
7
PHENIX: a comprehensive Python-based system for macromolecular structure solution.PHENIX:一个基于Python的用于大分子结构解析的综合系统。
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):213-21. doi: 10.1107/S0907444909052925. Epub 2010 Jan 22.
8
The structure of an integrin/talin complex reveals the basis of inside-out signal transduction.整合素/踝蛋白复合物的结构揭示了由内向外信号转导的基础。
EMBO J. 2009 Nov 18;28(22):3623-32. doi: 10.1038/emboj.2009.287. Epub 2009 Oct 1.
9
Kindling the flame of integrin activation and function with kindlins.通过踝蛋白激活整合素并激发其功能。
Curr Opin Hematol. 2009 Sep;16(5):323-8. doi: 10.1097/MOH.0b013e32832ea389.
10
Phaser crystallographic software.相位结晶学软件。
J Appl Crystallogr. 2007 Aug 1;40(Pt 4):658-674. doi: 10.1107/S0021889807021206. Epub 2007 Jul 13.