• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

鞘氨醇单胞菌 568 的高糖基转移活性内切几丁质酶合成长链壳寡糖。

Synthesis of long-chain chitooligosaccharides by a hypertransglycosylating processive endochitinase of Serratia proteamaculans 568.

机构信息

Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad, India.

出版信息

J Bacteriol. 2012 Aug;194(16):4260-71. doi: 10.1128/JB.06473-11. Epub 2012 Jun 8.

DOI:10.1128/JB.06473-11
PMID:22685288
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3416260/
Abstract

We describe the heterologous expression and characterization of a 407-residue single-domain glycosyl hydrolase family 18 chitinase (SpChiD) from Gram-negative Serratia proteamaculans 568 that has unprecedented catalytic properties. SpChiD was optimally active at pH 6.0 and 40 °C, where it showed a K(m) of 83 mg ml(-1), a k(cat) of 3.9 × 10(2) h(-1), and a k(cat)/K(m) of 4.7 h mg(-1) ml(-1) on colloidal chitin. On chitobiose, the K(m), k(cat), and k(cat)/K(m) were 203 μM, 1.3 × 10(2) h(-1), and 0.62 h(-1) μM(-1), respectively. Hydrolytic activity on chitooligosaccharides (CHOS) and colloidal chitin indicated that SpChiD was an endo-acting processive enzyme, with the unique ability to convert released chitobiose to N-acetylglucosamine, the major end product. SpChiD showed hyper transglycosylation (TG) with trimer-hexamer CHOS substrates, generating considerable amounts of long-chain CHOS. The TG activity of SpChiD was dependent on both the length and concentration of the oligomeric substrate and also on the enzyme concentration. The length and amount of accumulated TG products increased with increases in the length of the substrate and its concentration and decreased with increases in the enzyme concentration. The SpChiD bound to insoluble and soluble chitin substrates despite the absence of accessory domains. Sequence alignments and structural modeling indicated that SpChiD would have a deep substrate-binding groove lined with aromatic residues, which is characteristic of processive enzymes. SpChiD shows a combination of properties that seems rare among family 18 chitinases and that may resemble the properties of human chitotriosidase.

摘要

我们描述了革兰氏阴性沙雷氏菌 568 中一种 407 残基单结构域糖苷水解酶家族 18 几丁质酶(SpChiD)的异源表达和特性,该酶具有前所未有的催化特性。SpChiD 在 pH6.0 和 40°C 时具有最佳活性,在胶体几丁质上的 K(m)为 83mg ml(-1),k(cat)为 3.9×10(2) h(-1),k(cat)/K(m)为 4.7 h mg(-1) ml(-1)。在几丁二糖上,K(m)、k(cat)和 k(cat)/K(m)分别为 203 μM、1.3×10(2) h(-1)和 0.62 h(-1) μM(-1)。SpChiD 对几丁寡糖(CHOS)和胶体几丁质的水解活性表明,它是一种内切作用的连续酶,具有将释放的几丁二糖转化为主要终产物 N-乙酰葡萄糖胺的独特能力。SpChiD 对三聚物-六聚物 CHOS 底物具有超转糖基化(TG)活性,生成相当数量的长链 CHOS。SpChiD 的 TG 活性既依赖于寡聚物底物的长度和浓度,也依赖于酶的浓度。随着底物长度和浓度的增加以及酶浓度的降低,积累的 TG 产物的长度和数量增加。SpChiD 与不溶性和可溶性几丁质底物结合,尽管没有辅助结构域。序列比对和结构建模表明,SpChiD 将具有一个带有芳香族残基的深底物结合槽,这是连续酶的特征。SpChiD 表现出的一系列特性似乎在家族 18 几丁质酶中很少见,可能类似于人类几丁质酶的特性。

相似文献

1
Synthesis of long-chain chitooligosaccharides by a hypertransglycosylating processive endochitinase of Serratia proteamaculans 568.鞘氨醇单胞菌 568 的高糖基转移活性内切几丁质酶合成长链壳寡糖。
J Bacteriol. 2012 Aug;194(16):4260-71. doi: 10.1128/JB.06473-11. Epub 2012 Jun 8.
2
Inverse relationship between chitobiase and transglycosylation activities of chitinase-D from Serratia proteamaculans revealed by mutational and biophysical analyses.通过突变和生物物理分析揭示了粘质沙雷氏菌几丁质酶-D的壳二糖酶和转糖基化活性之间的负相关关系。
Sci Rep. 2015 Oct 23;5:15657. doi: 10.1038/srep15657.
3
Catalytic efficiency of chitinase-D on insoluble chitinous substrates was improved by fusing auxiliary domains.通过融合辅助结构域提高了几丁质酶-D对不溶性几丁质底物的催化效率。
PLoS One. 2015 Jan 23;10(1):e0116823. doi: 10.1371/journal.pone.0116823. eCollection 2015.
4
Transglycosylation by a chitinase from Enterobacter cloacae subsp. cloacae generates longer chitin oligosaccharides.解淀粉芽孢杆菌亚种 cloacae 的几丁质酶的转糖基作用生成更长的几丁寡糖。
Sci Rep. 2017 Jul 11;7(1):5113. doi: 10.1038/s41598-017-05140-3.
5
Transglycosylation by chitinase D from Serratia proteamaculans improved through altered substrate interactions.沙雷氏菌属几丁质酶 D 通过改变底物相互作用提高了转糖基化作用。
J Biol Chem. 2012 Dec 28;287(53):44619-27. doi: 10.1074/jbc.M112.400879. Epub 2012 Oct 31.
6
Multiple chitinases of an endophytic Serratia proteamaculans 568 generate chitin oligomers.一株植物内生沙雷氏菌 568 的多种几丁质酶产生几丁寡糖。
Bioresour Technol. 2012 May;112:261-9. doi: 10.1016/j.biortech.2012.02.062. Epub 2012 Feb 21.
7
Key Residues Affecting Transglycosylation Activity in Family 18 Chitinases: Insights into Donor and Acceptor Subsites.影响18家族几丁质酶转糖基化活性的关键残基:对供体和受体亚位点的见解
Biochemistry. 2018 Jul 24;57(29):4325-4337. doi: 10.1021/acs.biochem.8b00381. Epub 2018 Jul 11.
8
Mutagenesis and molecular dynamics simulations revealed the chitooligosaccharide entry and exit points for chitinase D from Serratia proteamaculans.诱变和分子动力学模拟揭示了粘质沙雷氏菌几丁质酶D的壳寡糖进出点。
Biochim Biophys Acta. 2014 Sep;1840(9):2685-94. doi: 10.1016/j.bbagen.2014.06.014. Epub 2014 Jun 25.
9
Production of bioactive chitosan oligosaccharides using the hypertransglycosylating chitinase-D from Serratia proteamaculans.利用鞘氨醇单胞菌来源的高转糖苷活性几丁质酶生产具有生物活性的壳寡糖。
Bioresour Technol. 2015 Dec;198:503-9. doi: 10.1016/j.biortech.2015.09.052. Epub 2015 Sep 25.
10
Applicability of endochitinase of Flavobacterium johnsoniae with transglycosylation activity in generating long-chain chitooligosaccharides.具有转糖苷活性的黄杆菌内切几丁质酶在生成长链壳寡糖中的适用性。
Int J Biol Macromol. 2018 Oct 1;117:62-71. doi: 10.1016/j.ijbiomac.2018.05.129. Epub 2018 May 22.

引用本文的文献

1
Chitinous material bioconversion by three new chitinases from the yeast Mestchnikowia pulcherrima.利用美丽毛霉中的三种新几丁质酶对几丁质物质进行生物转化。
Microb Cell Fact. 2024 Jan 20;23(1):31. doi: 10.1186/s12934-024-02300-9.
2
Crude Enzyme Concentrate of Filamentous Fungus Hydrolyzed Chitosan to Obtain Oligomers of Different Sizes.丝状真菌粗酶浓缩物水解壳聚糖以获得不同大小的低聚物。
Polymers (Basel). 2023 Apr 27;15(9):2079. doi: 10.3390/polym15092079.
3
Property and Function of a Novel Chitinase Containing Dual Catalytic Domains Capable of Converting Chitin Into -Acetyl-D-Glucosamine.一种含有双催化结构域、能够将几丁质转化为N-乙酰-D-葡萄糖胺的新型几丁质酶的性质与功能
Front Microbiol. 2022 Feb 24;13:790301. doi: 10.3389/fmicb.2022.790301. eCollection 2022.
4
Progress and challenges in the synthesis of sequence controlled polysaccharides.序列可控多糖合成的进展与挑战。
Beilstein J Org Chem. 2021 Aug 5;17:1981-2025. doi: 10.3762/bjoc.17.129. eCollection 2021.
5
Computational Analysis of Thermal Adaptation in Extremophilic Chitinases: The Achilles' Heel in Protein Structure and Industrial Utilization.极端嗜热几丁质酶热适应性的计算分析:蛋白质结构和工业利用中的阿喀琉斯之踵。
Molecules. 2021 Jan 29;26(3):707. doi: 10.3390/molecules26030707.
6
Chemoenzymatic Production and Engineering of Chitooligosaccharides and -acetyl Glucosamine for Refining Biological Activities.用于优化生物活性的壳寡糖和 N-乙酰葡糖胺的化学酶法生产与工程改造
Front Chem. 2020 Jun 24;8:469. doi: 10.3389/fchem.2020.00469. eCollection 2020.
7
Enzymatic Modification of Native Chitin and Conversion to Specialty Chemical Products.天然甲壳素的酶法修饰及特色化学品的转化。
Mar Drugs. 2020 Jan 30;18(2):93. doi: 10.3390/md18020093.
8
Cloning, purification, and characterization of an organic solvent-tolerant chitinase, MtCh509, from DAU221.从DAU221中克隆、纯化及鉴定一种耐有机溶剂的几丁质酶MtCh509
Biotechnol Biofuels. 2018 Nov 8;11:303. doi: 10.1186/s13068-018-1299-1. eCollection 2018.
9
Chitinase: diversity, limitations, and trends in engineering for suitable applications.几丁质酶:多样性、局限性及合适应用的工程改造趋势。
Biosci Rep. 2018 Aug 29;38(4). doi: 10.1042/BSR20180323. Print 2018 Sep 3.
10
Molecular characterization of a novel chitinase Chi1 from SYBC-H1 and its use in -acetyl-d-glucosamine production.来自SYBC-H1的新型几丁质酶Chi1的分子特征及其在生产N-乙酰-D-葡萄糖胺中的应用。
Biotechnol Biofuels. 2018 Jun 26;11:179. doi: 10.1186/s13068-018-1169-x. eCollection 2018.

本文引用的文献

1
Chitin binding proteins act synergistically with chitinases in Serratia proteamaculans 568.几丁质结合蛋白与鞘氨醇单胞菌 568 中的几丁质酶协同作用。
PLoS One. 2012;7(5):e36714. doi: 10.1371/journal.pone.0036714. Epub 2012 May 9.
2
Multiple chitinases of an endophytic Serratia proteamaculans 568 generate chitin oligomers.一株植物内生沙雷氏菌 568 的多种几丁质酶产生几丁寡糖。
Bioresour Technol. 2012 May;112:261-9. doi: 10.1016/j.biortech.2012.02.062. Epub 2012 Feb 21.
3
Human chitotriosidase-catalyzed hydrolysis of chitosan.人几丁质酶催化壳聚糖水解。
Biochemistry. 2012 Jan 10;51(1):487-95. doi: 10.1021/bi2015585. Epub 2011 Dec 20.
4
Chitinase from Autographa californica multiple nucleopolyhedrovirus: rapid purification from Sf-9 medium and mode of action.来自苜蓿银纹夜蛾多粒包埋核型多角体病毒的几丁质酶:从 Sf-9 培养基中快速纯化及作用模式
Biosci Biotechnol Biochem. 2011;75(9):1763-9. doi: 10.1271/bbb.110300. Epub 2011 Sep 7.
5
Mutational effects on transglycosylating activity of family 18 chitinases and construction of a hypertransglycosylating mutant.突变对 18 家族几丁质酶转糖苷活性的影响及高转糖苷突变体的构建。
Biochemistry. 2011 Jun 28;50(25):5693-703. doi: 10.1021/bi2002532. Epub 2011 Jun 2.
6
Chitooligosaccharide sensing and downstream signaling: contrasted outcomes in pathogenic and beneficial plant-microbe interactions.壳寡糖感知与下游信号转导:在植物-微生物致病与有益互作中的差异效应。
Planta. 2010 Sep;232(4):787-806. doi: 10.1007/s00425-010-1215-9. Epub 2010 Jul 16.
7
Biotechnological approaches to develop bacterial chitinases as a bioshield against fungal diseases of plants.利用生物技术开发细菌几丁质酶作为植物真菌病害的生物盾牌。
Crit Rev Biotechnol. 2010 Sep;30(3):231-41. doi: 10.3109/07388551.2010.487258.
8
Swapping the chitin-binding domain in Bacillus chitinases improves the substrate binding affinity and conformational stability.交换芽孢杆菌几丁质酶中的几丁质结合结构域可提高底物结合亲和力和构象稳定性。
Mol Biosyst. 2010 Aug;6(8):1492-502. doi: 10.1039/b923048c. Epub 2010 May 26.
9
Fusion of cellulose binding domain to the catalytic domain improves the activity and conformational stability of chitinase in Bacilluslicheniformis DSM13.纤维素结合域与催化结构域融合提高了地衣芽孢杆菌 DSM13 中几丁质酶的活性和构象稳定性。
Bioresour Technol. 2010 May;101(10):3635-41. doi: 10.1016/j.biortech.2009.12.118. Epub 2010 Jan 25.
10
Glyco-conjugates as elicitors or suppressors of plant innate immunity.糖缀合物作为植物先天免疫的激发子或抑制剂。
Glycobiology. 2010 Jan;20(4):406-19. doi: 10.1093/glycob/cwp201. Epub 2009 Dec 17.