Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad, India.
J Bacteriol. 2012 Aug;194(16):4260-71. doi: 10.1128/JB.06473-11. Epub 2012 Jun 8.
We describe the heterologous expression and characterization of a 407-residue single-domain glycosyl hydrolase family 18 chitinase (SpChiD) from Gram-negative Serratia proteamaculans 568 that has unprecedented catalytic properties. SpChiD was optimally active at pH 6.0 and 40 °C, where it showed a K(m) of 83 mg ml(-1), a k(cat) of 3.9 × 10(2) h(-1), and a k(cat)/K(m) of 4.7 h mg(-1) ml(-1) on colloidal chitin. On chitobiose, the K(m), k(cat), and k(cat)/K(m) were 203 μM, 1.3 × 10(2) h(-1), and 0.62 h(-1) μM(-1), respectively. Hydrolytic activity on chitooligosaccharides (CHOS) and colloidal chitin indicated that SpChiD was an endo-acting processive enzyme, with the unique ability to convert released chitobiose to N-acetylglucosamine, the major end product. SpChiD showed hyper transglycosylation (TG) with trimer-hexamer CHOS substrates, generating considerable amounts of long-chain CHOS. The TG activity of SpChiD was dependent on both the length and concentration of the oligomeric substrate and also on the enzyme concentration. The length and amount of accumulated TG products increased with increases in the length of the substrate and its concentration and decreased with increases in the enzyme concentration. The SpChiD bound to insoluble and soluble chitin substrates despite the absence of accessory domains. Sequence alignments and structural modeling indicated that SpChiD would have a deep substrate-binding groove lined with aromatic residues, which is characteristic of processive enzymes. SpChiD shows a combination of properties that seems rare among family 18 chitinases and that may resemble the properties of human chitotriosidase.
我们描述了革兰氏阴性沙雷氏菌 568 中一种 407 残基单结构域糖苷水解酶家族 18 几丁质酶(SpChiD)的异源表达和特性,该酶具有前所未有的催化特性。SpChiD 在 pH6.0 和 40°C 时具有最佳活性,在胶体几丁质上的 K(m)为 83mg ml(-1),k(cat)为 3.9×10(2) h(-1),k(cat)/K(m)为 4.7 h mg(-1) ml(-1)。在几丁二糖上,K(m)、k(cat)和 k(cat)/K(m)分别为 203 μM、1.3×10(2) h(-1)和 0.62 h(-1) μM(-1)。SpChiD 对几丁寡糖(CHOS)和胶体几丁质的水解活性表明,它是一种内切作用的连续酶,具有将释放的几丁二糖转化为主要终产物 N-乙酰葡萄糖胺的独特能力。SpChiD 对三聚物-六聚物 CHOS 底物具有超转糖基化(TG)活性,生成相当数量的长链 CHOS。SpChiD 的 TG 活性既依赖于寡聚物底物的长度和浓度,也依赖于酶的浓度。随着底物长度和浓度的增加以及酶浓度的降低,积累的 TG 产物的长度和数量增加。SpChiD 与不溶性和可溶性几丁质底物结合,尽管没有辅助结构域。序列比对和结构建模表明,SpChiD 将具有一个带有芳香族残基的深底物结合槽,这是连续酶的特征。SpChiD 表现出的一系列特性似乎在家族 18 几丁质酶中很少见,可能类似于人类几丁质酶的特性。