Ahmad Moaz, Singh Shailja, Afrin Farhat, Tuteja Renu
International Centre for Genetic Engineering and Biotechnology, Aruna Asaf Ali Marg, New Delhi, India.
Mol Biochem Parasitol. 2012 Sep;185(1):58-65. doi: 10.1016/j.molbiopara.2012.06.002. Epub 2012 Jun 13.
RuvB protein belongs to AAA+ family of enzymes involved in diverse cellular activities. In addition to the annotated two RuvB proteins in Plasmodium falciparum database, we report that a third RuvB protein is also present. The amino acid sequence analysis has revealed that P. falciparum RuvB3 (PfRuvB3) possesses Walker motif A, Walker motif B, sensor I and sensor II conserved motifs similar to yeast and human RuvB like proteins. The phylogenetic analysis revealed that PfRuvB3 is closely related to yeast RuvB like proteins which are essential for the survival of yeast. The biochemical characterization of recombinant PfRuvB3 confirms its ssDNA dependent ATPase activity. Using the truncated derivatives we show that Walker motif A is essential for the enzymatic activity of PfRuvB3. Using the immunodepletion assays we further show that the ATPase activity is attributable to PfRuvB3 protein. The endogenous P. falciparum RuvB3 contains the characteristic ATPase and some DNA helicase activities. The confocal microscopy analysis showed that this protein is mainly expressed during intraerythrocytic schizont stages of the parasite and is localized to the nuclear region. Once merozoite comes out from schizont, PfRuvB3 protein distinctly relocalized to the subnuclear region. The co-localization studies with a nucleolar marker PfNop1 further suggest that in P. falciparum RuvB3 localizes into a discrete nuclear compartment. On the basis of these studies it can be speculated that P. falciparum RuvB3 is most likely required for intraerythrocytic schizogony.
RuvB蛋白属于参与多种细胞活动的AAA+酶家族。除了恶性疟原虫数据库中注释的两种RuvB蛋白外,我们报告还存在第三种RuvB蛋白。氨基酸序列分析表明,恶性疟原虫RuvB3(PfRuvB3)具有与酵母和人类RuvB样蛋白相似的沃克基序A、沃克基序B、传感器I和传感器II保守基序。系统发育分析表明,PfRuvB3与酵母RuvB样蛋白密切相关,而酵母RuvB样蛋白对酵母的生存至关重要。重组PfRuvB3的生化特性证实了其依赖单链DNA的ATP酶活性。使用截短衍生物,我们表明沃克基序A对PfRuvB3的酶活性至关重要。使用免疫去除测定,我们进一步表明ATP酶活性归因于PfRuvB3蛋白。恶性疟原虫内源性RuvB3具有特征性的ATP酶和一些DNA解旋酶活性。共聚焦显微镜分析表明,该蛋白主要在寄生虫的红细胞内裂殖体阶段表达,并定位于核区域。一旦裂殖子从裂殖体中出来,PfRuvB3蛋白明显重新定位于核下区域。与核仁标记物PfNop1的共定位研究进一步表明,在恶性疟原虫中,RuvB3定位于一个离散的核区室。基于这些研究,可以推测恶性疟原虫RuvB3最有可能是红细胞内裂体增殖所必需的。