Malaria Group, International Centre for Genetic Engineering and Biotechnology, P. O. Box 10504, Aruna Asaf Ali Marg, New Delhi 110067, India.
Gene. 2013 Jun 10;522(1):46-59. doi: 10.1016/j.gene.2013.03.063. Epub 2013 Apr 2.
DEAD box RNA helicases play crucial roles in RNA metabolism such as splicing, ribosome biogenesis, RNA transport, degradation and translation. DDX6/DOZI (development of zygote inhibited) is one of the well characterized member of the DEAD box family and is highly conserved from humans to malaria parasite. DDX6 is involved in a variety of biological processes, which include the sexual development of the protozoan parasite. In the present manuscript we report that P. falciparum DOZI (DDX6 homologue); PfDZ50 contains the characteristic DNA and RNA binding, nucleic acid-dependent ATPase and RNA unwinding activities. Enzymatic characterization of truncated derivatives of PfDZ50 such as PfDZ50T1 (domain 1) and PfDZ50T2 (domain 2) shows that none of them contains ATPase activity. Furthermore, we confirmed that PfDZ50 interacts with PfeIF4E mainly through domain 1. Using in vitro translation assays we show that PfDZ50 inhibits translation. With the same assays we further report that externally added PfeIF4E restores ~70% of translation. Using immunofluorescence assays we demonstrate that PfDZ50 is localized mainly in the cytoplasm in the asexual intraerythrocytic developmental stages of P. falciparum. The localization pattern further suggests that PfDZ50 appears typically in granular bodies throughout the cytoplasm. Thus these studies will advance our knowledge regarding the function of PfDZ50/DDX6 in general.
DEAD 盒 RNA 解旋酶在 RNA 代谢中发挥着至关重要的作用,如剪接、核糖体生物发生、RNA 转运、降解和翻译。DDX6/DOZI(合子发育抑制)是 DEAD 盒家族中特征明确的成员之一,从人类到疟原虫都高度保守。DDX6 参与了多种生物学过程,包括原生动物寄生虫的性发育。在本手稿中,我们报告 Pfalciparum DOZI(DDX6 同源物);PfDZ50 包含特征性的 DNA 和 RNA 结合、核酸依赖的 ATP 酶和 RNA 解链活性。PfDZ50 的截断衍生物(如 PfDZ50T1(结构域 1)和 PfDZ50T2(结构域 2))的酶学特征表明,它们都不含有 ATP 酶活性。此外,我们证实 PfDZ50 主要通过结构域 1 与 PfeIF4E 相互作用。通过体外翻译实验,我们发现 PfDZ50 抑制翻译。通过同样的实验,我们进一步报告,外加的 PfeIF4E 可以恢复约 70%的翻译。通过免疫荧光实验,我们证明 PfDZ50 主要在疟原虫无性红细胞内发育阶段的细胞质中定位。这种定位模式进一步表明,PfDZ50 通常出现在细胞质中的颗粒状结构中。因此,这些研究将增进我们对 PfDZ50/DDX6 一般功能的认识。