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电鳗目鱼类非洲电鳗器官和骨骼肌之间基因和蛋白质的差异表达。

Differential expression of genes and proteins between electric organ and skeletal muscle in the mormyrid electric fish Brienomyrus brachyistius.

机构信息

Department of Neurobiology and Behavior, Cornell University, Ithaca, NY, USA.

出版信息

J Exp Biol. 2012 Jul 15;215(Pt 14):2479-94. doi: 10.1242/jeb.063222.

Abstract

Electric organs (EOs) have evolved independently in vertebrates six times from skeletal muscle (SM). The transcriptional changes accompanying this developmental transformation are not presently well understood. Mormyrids and gymnotiforms are two highly convergent groups of weakly electric fish that have independently evolved EOs: while much is known about development and gene expression in gymnotiforms, very little is known about development and gene expression in mormyrids. This lack of data limits prospects for comparative work. We report here on the characterization of 28 differentially expressed genes between SM and EO tissues in the mormyrid Brienomyrus brachyistius, which were identified using suppressive subtractive hybridization (SSH). Forward and reverse SSH was performed on tissue samples of EO and SM resulting in one cDNA library enriched with mRNAs expressed in EO, and a second library representing mRNAs unique to SM. Nineteen expressed sequence tags (ESTs) were identified in EO and nine were identified in SM using BLAST searching of Danio rerio sequences available in NCBI databases. We confirmed differential expression of all 28 ESTs using RT-PCR. In EO, these ESTs represent four classes of proteins: (1) ion pumps, including the α- and β-subunits of Na(+)/K(+)-ATPase, and a plasma membrane Ca(2+)-ATPase; (2) Ca(2+)-binding protein S100, several parvalbumin paralogs, calcyclin-binding protein and neurogranin; (3) sarcomeric proteins troponin I, myosin heavy chain and actin-related protein complex subunit 3 (Arcp3); and (4) the transcription factors enhancer of rudimentary homolog (ERH) and myocyte enhancer factor 2A (MEF2A). Immunohistochemistry and western blotting were used to demonstrate the translation of seven proteins (myosin heavy chain, Na(+)/K(+)-ATPase, plasma membrane Ca(2+)-ATPase, MEF2, troponin and parvalbumin) and their cellular localization in EO and SM. Our findings suggest that mormyrids express several paralogs of muscle-specific genes and the proteins they encode in EOs, unlike gymnotiforms, which may post-transcriptionally repress several sarcomeric proteins. In spite of the similarity in the physiology and function of EOs in mormyrids and gymnotiforms, this study indicates that the mechanisms of development in the two groups may be considerably different.

摘要

电器官 (EOs) 已经在脊椎动物中独立进化了六次,从骨骼肌 (SM) 进化而来。这种发育转变所伴随的转录变化目前还不是很清楚。电鳗和电鳗目是两种高度趋同的弱电鱼类群,它们已经独立进化出电器官:虽然人们对电鳗目的发育和基因表达有很多了解,但对电鳗目鱼类的发育和基因表达却知之甚少。这种数据的缺乏限制了比较工作的前景。我们在这里报告了在电鳗目鱼类Brienomyrus brachyistius 的 SM 和 EO 组织之间的 28 个差异表达基因的特征,这些基因是通过抑制性消减杂交 (SSH) 鉴定的。对 EO 和 SM 的组织样本进行正向和反向 SSH,得到一个富含 EO 中表达的 mRNA 的 cDNA 文库,以及一个代表 SM 中独特 mRNA 的文库。使用 NCBI 数据库中可获得的斑马鱼序列的 BLAST 搜索,在 EO 中鉴定了 19 个表达序列标签 (ESTs),在 SM 中鉴定了 9 个 ESTs。我们使用 RT-PCR 证实了所有 28 个 ESTs 的差异表达。在 EO 中,这些 ESTs 代表四类蛋白质:(1) 离子泵,包括 Na(+)/K(+)-ATPase 的α和β亚基,以及质膜 Ca(2+)-ATPase;(2) Ca(2+)结合蛋白 S100、几种副甲状腺蛋白同工酶、钙调蛋白结合蛋白和神经颗粒蛋白;(3) 肌球蛋白重链和肌动蛋白相关蛋白复合物亚基 3 (Arcp3) 的肌节蛋白;和 (4) 转录因子增强素 rudimentary homolog (ERH) 和肌细胞增强因子 2A (MEF2A)。免疫组织化学和 Western 印迹用于证明七种蛋白质 (肌球蛋白重链、Na(+)/K(+)-ATPase、质膜 Ca(2+)-ATPase、MEF2、肌钙蛋白和副甲状腺蛋白) 的翻译及其在 EO 和 SM 中的细胞定位。我们的研究结果表明,电鳗目鱼类在 EO 中表达几种肌肉特异性基因及其编码的蛋白质的同工酶,而不像电鳗目鱼类那样,可能会在后转录水平抑制几种肌节蛋白。尽管电鳗目鱼类和电鳗目鱼类的 EO 在生理学和功能上有相似之处,但这项研究表明,这两个群体的发育机制可能有很大的不同。

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