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嗜热栖热菌丝氨酸:丙酮酸转氨酶的晶体结构及底物特异性

Crystal structure and substrate specificity of the thermophilic serine:pyruvate aminotransferase from Sulfolobus solfataricus.

作者信息

Sayer Christopher, Bommer Martin, Isupov Michail, Ward John, Littlechild Jennifer

机构信息

Henry Wellcome Building for Biocatalysis, Biosciences, College of Life and Environmental Sciences, University of Exeter, Stocker Road, Exeter EX4 4QD, England.

出版信息

Acta Crystallogr D Biol Crystallogr. 2012 Jul;68(Pt 7):763-72. doi: 10.1107/S0907444912011274. Epub 2012 Jun 15.

Abstract

The three-dimensional structure of the Sulfolobus solfataricus serine:pyruvate aminotransferase has been determined to 1.8 Å resolution. The structure of the protein is a homodimer that adopts the type I fold of pyridoxal 5'-phosphate (PLP)-dependent aminotransferases. The structure revealed the PLP cofactor covalently bound in the active site to the active-site lysine in the internal aldimine form. The structure of the S. solfataricus enzyme was also determined with an amino form of the cofactor pyridoxamine 5'-phosphate bound in the active site and in complex with gabaculine, an aminotransferase inhibitor. These structures showed the changes in the enzyme active site during the course of the catalytic reaction. A comparison of the structure of the S. solfataricus enzyme with that of the closely related alanine:glyoxylate aminotransferase has identified structural features that are proposed to be responsible for the differences in substrate specificity between the two enzymes. These results have been complemented by biochemical studies of the substrate specificity and thermostability of the S. solfataricus enzyme.

摘要

嗜热栖热菌丝氨酸

丙酮酸转氨酶的三维结构已确定至1.8 Å分辨率。该蛋白质的结构是一个同型二聚体,采用依赖于磷酸吡哆醛(PLP)的转氨酶的I型折叠。该结构揭示了PLP辅因子以内部醛亚胺形式在活性位点与活性位点赖氨酸共价结合。嗜热栖热菌酶的结构也在活性位点结合辅因子磷酸吡哆胺的氨基形式并与转氨酶抑制剂加巴喷丁形成复合物的情况下确定。这些结构显示了催化反应过程中酶活性位点的变化。将嗜热栖热菌酶的结构与密切相关的丙氨酸:乙醛酸转氨酶的结构进行比较,确定了被认为是导致这两种酶底物特异性差异的结构特征。嗜热栖热菌酶的底物特异性和热稳定性的生化研究补充了这些结果。

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