Chhabra Gagan, Mathur Divya, Dixit Aparna, Garg Lalit C
Gene Regulation Laboratory, National Institute of Immunology, Aruna Asaf Ali Marg, New Delhi, India.
Protein Expr Purif. 2012 Sep;85(1):117-24. doi: 10.1016/j.pep.2012.07.004. Epub 2012 Jul 15.
Phosphoglucomutase (PGM) plays an important role in polysaccharide capsule formation and virulence in a number of bacterial pathogens. However, the enzyme has not yet been characterized from Mycobacterium tuberculosis (Mtb). Here, we report the biochemical properties of recombinant Mtb-PGM as well as the in silico structural analysis from Mtb H37Rv. The purified recombinant enzyme was enzymatically active with a specific activity of 67.5 U/mg and experimental k(cat) of 70.31 s(-1) for the substrate glucose-1-phosphate. The enzyme was stable in pH range 6.5-7.4 and exhibited temperature optima range between 30 and 40°C. Various kinetic parameters and constants of the rPGM were determined. A structural comparison of Modeller generated 3D Mtb-PGM structure with rabbit muscle PGM revealed that the two enzymes share the same overall heart shape and four-domain architecture, despite having only 17% sequence identity. However, certain interesting differences between the two have been identified, which provide an opportunity for designing new drugs to specifically target the Mtb-PGM. Also, in the absence of the crystal structure of the Mtb-PGM, the modeled structure could be further explored for in silico docking studies with suitable inhibitors.
磷酸葡萄糖变位酶(PGM)在多种细菌病原体的多糖荚膜形成和毒力方面发挥着重要作用。然而,该酶尚未在结核分枝杆菌(Mtb)中得到表征。在此,我们报告了重组Mtb - PGM的生化特性以及来自Mtb H37Rv的计算机模拟结构分析。纯化后的重组酶具有酶活性,对底物葡萄糖 - 1 - 磷酸的比活性为67.5 U/mg,实验催化常数k(cat)为70.31 s(-1)。该酶在pH值6.5 - 7.4范围内稳定,最适温度范围在30至40°C之间。测定了rPGM的各种动力学参数和常数。通过Modeller生成的3D Mtb - PGM结构与兔肌肉PGM的结构比较表明,尽管两者序列同一性仅为17%,但这两种酶具有相同的整体心形和四结构域架构。然而,已确定两者之间存在某些有趣的差异,这为设计专门靶向Mtb - PGM的新药提供了机会。此外,在缺乏Mtb - PGM晶体结构的情况下,可以进一步探索该模拟结构用于与合适抑制剂的计算机模拟对接研究。