Marine Biotechnology Laboratory, State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, P.R. China.
Sci Rep. 2012;2:528. doi: 10.1038/srep00528. Epub 2012 Jul 24.
The present knowledge of microbial community mainly focus on total sponge, the spatial distribution of microbes in sponges is rarely known, especially those with potential ecological functions. In this study, based on gene library and ∫-LIBSHUFF analysis, the spatial distribution of prokaryotic symbionts and nitrogen cycling genes in the cortex and endosome sections of sponge Astrosclera willeyana were investigated. A significance difference of bacterial phylotypes between the cortex and endosome was revealed. For example Bacteroidetes, Frankineae and Propionibacterineae were detected only in the endosome, whereas Cyanobacteria, Planctomycetacia and Micrococcineae were only associated with the cortex. Some branches of α-Proteobacteria, γ-Proteobacteria, Corynebacterineae, Acidimicobidae, Crenarchaeota and Euryarchaeota also showed distribution difference. Bacterial denitrifiers and ammonia oxidizing bacteria (AOB) were observed using nirS and amoA genes as markers. Particularly, AOB were only associated with the endosome. This study highlighted the spatial distribution of bacterial symbionts especially those with ammonia oxidization function.
目前的微生物群落知识主要集中在海绵总群上,对海绵中微生物的空间分布知之甚少,特别是那些具有潜在生态功能的微生物。在这项研究中,基于基因文库和∫-LIBSHUFF 分析,研究了海绵Astrosclera willeyana 皮层和内体部分的原核共生体和氮循环基因的空间分布。结果表明,皮层和内体之间的细菌型存在显著差异。例如,Bacteroidetes、Frankineae 和 Propionibacterineae 仅在内体中检测到,而 Cyanobacteria、Planctomycetacia 和 Micrococcineae 仅与皮层有关。α-Proteobacteria、γ-Proteobacteria、Corynebacterineae、Acidimicobidae、Crenarchaeota 和 Euryarchaeota 的一些分支也表现出分布差异。使用 nirS 和 amoA 基因作为标记观察到细菌脱氮菌和氨氧化菌(AOB)。特别是,AOB 仅与内体有关。本研究强调了细菌共生体的空间分布,特别是那些具有氨氧化功能的共生体。