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采用超高深度焦磷酸测序技术评估替拉瑞韦治疗慢性丙型肝炎患者的耐药变异持续性。

Evaluation of persistence of resistant variants with ultra-deep pyrosequencing in chronic hepatitis C patients treated with telaprevir.

机构信息

Academic Medical Center, Department of Medical Microbiology, Section of Clinical Virology, Amsterdam, The Netherlands.

出版信息

PLoS One. 2012;7(7):e41191. doi: 10.1371/journal.pone.0041191. Epub 2012 Jul 27.

DOI:10.1371/journal.pone.0041191
PMID:22848441
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3407168/
Abstract

BACKGROUND & AIMS: Telaprevir, a hepatitis C virus NS3/4A protease inhibitor has significantly improved sustained viral response rates when given in combination with pegylated interferon alfa-2a and ribavirin, compared with current standard of care in hepatitis C virus genotype 1 infected patients. In patients with a failed sustained response, the emergence of drug-resistant variants during treatment has been reported. It is unclear to what extent these variants persist in untreated patients. The aim of this study was to assess using ultra-deep pyrosequencing, whether after 4 years follow-up, the frequency of resistant variants is increased compared to pre-treatment frequencies following 14 days of telaprevir treatment.

METHODS

Fifteen patients from 2 previous telaprevir phase 1 clinical studies (VX04-950-101 and VX05-950-103) were included. These patients all received telaprevir monotherapy for 14 days, and 2 patients subsequently received standard of care. Variants at previously well-characterized NS3 protease positions V36, T54, R155 and A156 were assessed at baseline and after a follow-up of 4±1.2 years by ultra-deep pyrosequencing. The prevalence of resistant variants at follow-up was compared to baseline.

RESULTS

Resistance associated mutations were detectable at low frequency at baseline. In general, prevalence of resistance mutations at follow-up was not increased compared to baseline. Only one patient had a small, but statistically significant, increase in the number of V36M and T54S variants 4 years after telaprevir-dosing.

CONCLUSION

In patients treated for 14 days with telaprevir monotherapy, ultra-deep pyrosequencing indicates that long-term persistence of resistant variants is rare.

摘要

背景与目的

替拉瑞韦是一种丙型肝炎病毒 NS3/4A 蛋白酶抑制剂,与聚乙二醇干扰素 alfa-2a 和利巴韦林联合使用时,与丙型肝炎病毒 1 型感染患者的当前标准治疗相比,显著提高了持续病毒学应答率。在治疗过程中出现耐药变异的失代偿患者中,已有报道。目前尚不清楚这些变异在未治疗的患者中持续存在的程度。本研究旨在使用超深度焦磷酸测序评估,与替拉瑞韦治疗 14 天后的预处理频率相比,在 4 年随访后,耐药变异的频率是否增加。

方法

纳入来自 2 项先前替拉瑞韦 1 期临床研究(VX04-950-101 和 VX05-950-103)的 15 例患者。这些患者均接受替拉瑞韦单药治疗 14 天,其中 2 例随后接受标准治疗。通过超深度焦磷酸测序,在基线和 4±1.2 年随访时,评估先前已充分描述的 NS3 蛋白酶位置 V36、T54、R155 和 A156 的变异。将随访时的耐药变异流行率与基线进行比较。

结果

基线时可检测到低频率的耐药相关突变。一般来说,与基线相比,随访时耐药突变的流行率没有增加。只有 1 例患者在替拉瑞韦给药 4 年后,V36M 和 T54S 变异的数量略有但具有统计学意义的增加。

结论

在接受替拉瑞韦单药治疗 14 天的患者中,超深度焦磷酸测序表明,耐药变异的长期持续存在较为罕见。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dfe7/3407168/ca7494240142/pone.0041191.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dfe7/3407168/2c3f532a8150/pone.0041191.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dfe7/3407168/5ba322f02f36/pone.0041191.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dfe7/3407168/b3cdeaefbe29/pone.0041191.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dfe7/3407168/677bdc8611ac/pone.0041191.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dfe7/3407168/ca7494240142/pone.0041191.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dfe7/3407168/2c3f532a8150/pone.0041191.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dfe7/3407168/5ba322f02f36/pone.0041191.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dfe7/3407168/b3cdeaefbe29/pone.0041191.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dfe7/3407168/677bdc8611ac/pone.0041191.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dfe7/3407168/ca7494240142/pone.0041191.g005.jpg

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