Department of Endocrinology, Beijing Tongren Hospital, Capital Medical University, Beijing, China.
PLoS One. 2012;7(8):e42881. doi: 10.1371/journal.pone.0042881. Epub 2012 Aug 6.
Gene-gene interactions may be partly responsible for complex traits such as obesity. Increasing evidence suggests that the renin-angiotensin system (RAS) contributes to the etiology of obesity. How the epistasis of genes in the RAS contributes to obesity is still under research. We aim to evaluate the contribution of RAS-related gene interactions to a predisposition of obesity in a Chinese population.
We selected six single nucleotide polymorphisms (SNPs) located in angiotensin (AGT), angiotensin converting enzyme (ACE), angiotensin type 1 receptor (AGTR1), MAS1, nitric oxide synthase 3 (NOS3) and the bradykinin B2 receptor gene (BDKRB2), and genotyped them in 324 unrelated individuals with obesity (BMI ≥ 28 kg/m(2)) and 373 non-obese controls (BMI 18.5 to <24 kg/m(2)) from a large scale population-based cohort. We analyzed gene-gene interactions among 6 polymorphic loci using the Generalized Multifactor Dimensionality Reduction (GMDR) method, which has been shown to be effective for detecting gene-gene interactions in case-control studies with relatively small samples. Then we used logistic regression models to confirm the best combination of loci identified in the GMDR. It showed a significant gene-gene interaction between the rs220721 polymorphism in the MAS1 gene and the rs1799722 polymorphism in the gene BDKB2R. The best two-locus combination scored 9 for cross-validation consistency and 9 for sign test (p = 0.0107). This interaction showed the maximum consistency and minimum prediction error among all gene-gene interaction models evaluated. Moreover, the combination of the MAS1 rs220721 and the BDKRB2 rs1799722 was associated with a significantly increased risk of obesity (OR 1.82, CI 95%: 1.15-2.88, p = 0.0103).
These results suggest that the SNPs from the RAS-related genes may contribute to the risk of obesity in an interactive manner in a Chinese population. The gene-gene interaction may serve as a novel area for obesity research.
基因-基因相互作用可能是肥胖等复杂特征的部分原因。越来越多的证据表明肾素-血管紧张素系统(RAS)有助于肥胖的病因。RAS 中基因的上位性如何导致肥胖仍在研究中。我们旨在评估 RAS 相关基因相互作用对中国人群肥胖易感性的贡献。
我们选择了六个位于血管紧张素(AGT)、血管紧张素转换酶(ACE)、血管紧张素 1 受体(AGTR1)、MAS1、一氧化氮合酶 3(NOS3)和缓激肽 B2 受体基因(BDKRB2)中的单核苷酸多态性(SNP),并对来自大规模基于人群的队列的 324 名肥胖个体(BMI≥28kg/m2)和 373 名非肥胖对照者(BMI 18.5 至<24kg/m2)进行了基因分型。我们使用广义多因子降维(GMDR)方法分析了 6 个多态性位点之间的基因-基因相互作用,该方法已被证明可有效检测具有相对较小样本量的病例对照研究中的基因-基因相互作用。然后,我们使用逻辑回归模型来确认 GMDR 中鉴定出的最佳基因座组合。结果显示,MAS1 基因中的 rs220721 多态性与基因 BDKRB2R 中的 rs1799722 多态性之间存在显著的基因-基因相互作用。最佳的两位点组合在交叉验证一致性方面得分为 9,在符号检验方面得分为 9(p=0.0107)。在所有评估的基因-基因相互作用模型中,该相互作用显示出最大的一致性和最小的预测误差。此外,MAS1 rs220721 和 BDKRB2 rs1799722 的组合与肥胖的显著增加风险相关(OR 1.82,95%CI:1.15-2.88,p=0.0103)。
这些结果表明,RAS 相关基因的 SNP 可能以相互作用的方式在中国人群中导致肥胖的风险增加。基因-基因相互作用可能成为肥胖研究的一个新领域。