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葡萄牙碳青霉烯类耐药鲍曼不动杆菌分离株的遗传多样性和克隆进化及 ST118 的传播。

Genetic diversity and clonal evolution of carbapenem-resistant Acinetobacter baumannii isolates from Portugal and the dissemination of ST118.

机构信息

National Reference Laboratory of Antimicrobial Resistances, Department of Infectious Diseases, National Institute of Health Dr Ricardo Jorge, Av. Padre Cruz, 1649-016 Lisbon, Portugal.

出版信息

Int J Antimicrob Agents. 2012 Nov;40(5):398-403. doi: 10.1016/j.ijantimicag.2012.06.013. Epub 2012 Aug 11.

DOI:10.1016/j.ijantimicag.2012.06.013
PMID:22890192
Abstract

In this study, 116 multidrug-resistant Acinetobacter baumannii (MDR-Ab) isolates recovered in various regions of Portugal were studied. All isolates were non-susceptible to tigecycline; one isolate was also non-susceptible to colistin, making it a step closer to pandrug resistance. Among 72 isolates tested by PFGE, 98.6% carried bla(OXA-66), 1.4% bla(OXA-104), 77.8% bla(OXA-23), 23.6% bla(OXA-24), 18.1% bla(TEM-1) and 1.4% bla(CTX-M-15-like) genes. No OXA-58 or metallo-β-lactamase-encoding genes were detected. ISAba1 was found in 58/72 isolates (80.6%). Among these, ISAba1 was found upstream of bla(OXA-51-like) in 54 isolates. All but two of these isolates also carried ISAba1-bla(OXA-23), highlighting the coexistence of ISAba1-bla(OXA-51-like) and ISAba1-bla(OXA-23) genetic platforms, emphasising the importance of mobile genetic elements in the dissemination of carbapenem-hydrolysing class D β-lactamase genes. Tn2006-like and Tn2008-like, found within ST92 and ST118, may reflect either multiple genetic structures in the origin of bla(OXA-23) acquisition or interclonal complex evolution. These results indicate that there may exist different genetic origins for carbapenem resistance among MDR-Ab isolates. Six PFGE profiles were associated with three major sequence types, with ST118 (OXA-23- or OXA-24-producer) being widely disseminated since 2009. ST98 (described so far as endemic in Portugal) and ST92 (which co-existed with ST98 before 2009) appeared to have been gradually replaced by ST118. The new ST188 (OXA-104-producer) was detected for the first time in this country. Identification of an extensively drug-resistant ST118 and carbapenem-resistant ST92, ST98 and ST118 isolates, both in community and healthcare facilities, demonstrates the menace of A. baumannii-associated infections.

摘要

在这项研究中,研究了在葡萄牙不同地区回收的 116 株多药耐药鲍曼不动杆菌(MDR-Ab)分离株。所有分离株均对替加环素不敏感;有一株分离株也对黏菌素不敏感,使其更接近泛耐药性。在经过 PFGE 测试的 72 株分离株中,98.6%携带 bla(OXA-66),1.4%携带 bla(OXA-104),77.8%携带 bla(OXA-23),23.6%携带 bla(OXA-24),18.1%携带 bla(TEM-1)和 1.4%携带 bla(CTX-M-15-like)基因。未检测到 OXA-58 或金属β-内酰胺酶编码基因。发现 58/72 株(80.6%)分离株中存在 ISAba1。其中,ISAba1 在 54 株bla(OXA-51-like)上游发现。除了两个例外,这些分离株还携带 ISAba1-bla(OXA-23),突出了 ISAba1-bla(OXA-51-like)和 ISAba1-bla(OXA-23)遗传平台的共存,强调了移动遗传元件在碳青霉烯水解类 Dβ-内酰胺酶基因传播中的重要性。Tn2006-like 和 Tn2008-like 存在于 ST92 和 ST118 中,可能反映了 bla(OXA-23)获得的起源存在不同的遗传结构,或者克隆间复杂进化的存在。这些结果表明,MDR-Ab 分离株中碳青霉烯耐药可能存在不同的遗传起源。6 种 PFGE 图谱与 3 种主要序列类型相关,ST118(OXA-23 或 OXA-24 生产者)自 2009 年以来广泛传播。ST98(迄今为止被描述为葡萄牙特有的)和 ST92(2009 年前与 ST98 共存)似乎已逐渐被 ST118 取代。新的 ST188(OXA-104 生产者)首次在该国被发现。在社区和医疗保健机构中,广泛耐药的 ST118 和耐碳青霉烯的 ST92、ST98 和 ST118 分离株的鉴定表明,与鲍曼不动杆菌相关的感染威胁很大。

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