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一种二维 NMR 谱中自动信号分类的通用贝叶斯方法,结合了多元判别分析。

A general Bayesian method for an automated signal class recognition in 2D NMR spectra combined with a multivariate discriminant analysis.

机构信息

Department of Biophysics, Max-Planck-Institute for Medical Research, P.O. Box 103820, D-69028, Heidelberg, Germany.

出版信息

J Biomol NMR. 1995 Apr;5(3):287-96. doi: 10.1007/BF00211755.

Abstract

A generally applicable method for the automated classification of 2D NMR peaks has been developed, based on a Bayesian approach coupled to a multivariate linear discriminant analysis of the data. The method can separate true NMR signals from noise signals, solvent stripes and artefact signals. The analysis relies on the assumption that the different signal classes have different distributions of specific properties such as line shapes, line widths and intensities. As to be expected, the correlation network of the distributions of the selected properties affects the choice of the discriminant function and the final selection of signal properties. The classification rule for the signal classes was deduced from Bayes's theorem. The method was successfully tested on a NOESY spectrum of HPr protein from Staphylococcus aureus. The calculated probabilities for the different signal class memberships are realistic and reliable, with a high efficiency of discrimination between peaks that are true NOE signals and those that are not.

摘要

已经开发出一种基于贝叶斯方法并结合数据的多元线性判别分析的 2D NMR 峰自动分类通用方法。该方法可以将真实的 NMR 信号与噪声信号、溶剂条纹和伪信号区分开来。该分析依赖于这样的假设,即不同的信号类别具有不同的特定属性(如线形状、线宽和强度)分布。可以预期的是,所选属性分布的相关网络会影响判别函数的选择和最终信号属性的选择。信号类别的分类规则是从贝叶斯定理推导出来的。该方法已成功应用于金黄色葡萄球菌 HPr 蛋白的 NOESY 光谱。不同信号类别的计算概率是现实和可靠的,具有区分真实 NOE 信号和非真实 NOE 信号的高效率。

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