Department of Spine Surgery, Changzheng Hospital, Second Military Medical University, Shanghai, China.
PLoS One. 2012;7(7):e41610. doi: 10.1371/journal.pone.0041610. Epub 2012 Jul 23.
Despite the knowledge of many genetic alterations present in osteosarcoma, the complexity of this disease precludes placing its biology into a simple conceptual framework. Lysyl oxidase (LOX) catalyzes the cross-linking of elastin and collagen, which is essential for the structural integrity and function of bone tissue. In the current study, we performed genomic sequencing on all seven exons--including the intron-exon splice sites, and the putative promoter region of LOX gene--followed by luciferase reporter assay to analyze the function of newly identified polymorphisms. Associations between LOX polymorphisms and osteosarcoma were then evaluated. Our sequencing data revealed three polymorphisms (-22G/C, 225C/G, and 473G/A) in the exons and promoter region of LOX. The -22G/C polymorphism lies in the downstream core promoter element (DPE) region and caused a decrease in promoter activity of LOX. The prevalence of the -22C allele and 473A allele were significantly increased in osteosarcoma patients compared to controls (odds ratio [OR] = 3.88, 95% confidence interval [CI]= 1.94-7.78, p = 4.18×10(-5), and OR = 1.38, 95%CI = 1.07-1.78, p = 0.013; p 0.0167 was considered significant after Bonferroni correction). Analyzing haplotype showed that the frequency of CCG haplotype (-22, 225, 473) was significantly higher in osteosarcoma cases than in healthy controls after Bonferroni correction (p = 4.46×10(-4)). These results indicate that the -22G/C polymorphism may affect the expression of LOX, and that -22G/C and 473G/A polymorphisms may be new risk factors for osteosarcoma. These findings reveal a potential new pathway by which genetic polymorphisms may affect human diseases.
尽管人们已经了解了骨肉瘤中存在的许多基因改变,但这种疾病的复杂性使得其生物学无法简单地归结为一个概念框架。赖氨酰氧化酶(LOX)催化弹性蛋白和胶原蛋白的交联,这对于骨组织的结构完整性和功能至关重要。在本研究中,我们对 LOX 基因的所有七个外显子(包括内含子-外显子拼接位点和推定启动子区域)进行了基因组测序,随后进行了荧光素酶报告基因检测,以分析新鉴定的多态性的功能。然后评估了 LOX 多态性与骨肉瘤之间的关联。我们的测序数据显示,在 LOX 的外显子和启动子区域发现了三个多态性(-22G/C、225C/G 和 473G/A)。-22G/C 多态性位于下游核心启动子元件(DPE)区域,导致 LOX 启动子活性降低。与对照组相比,骨肉瘤患者中-22C 等位基因和 473A 等位基因的发生率显著增加(比值比[OR] = 3.88,95%置信区间[CI]= 1.94-7.78,p = 4.18×10(-5),和 OR = 1.38,95%CI=1.07-1.78,p=0.013;p 0.0167 在经过 Bonferroni 校正后被认为具有显著性)。分析单倍型显示,在经过 Bonferroni 校正后,骨肉瘤病例中-22、225、473 的 CCG 单倍型频率明显高于健康对照组(p=4.46×10(-4))。这些结果表明,-22G/C 多态性可能影响 LOX 的表达,而-22G/C 和 473G/A 多态性可能是骨肉瘤的新危险因素。这些发现揭示了遗传多态性可能影响人类疾病的一个潜在新途径。