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西班牙一个地方性局限地区山羊霉形体羊种分离株的意外遗传多样性。

Unexpected genetic diversity of Mycoplasma agalactiae caprine isolates from an endemic geographically restricted area of Spain.

机构信息

Departamento de Sanidad Animal, Facultad de Veterinaria, Universidad de Murcia, Campus de Espinardo s/n, 30100, Murcia, Spain.

出版信息

BMC Vet Res. 2012 Aug 27;8:146. doi: 10.1186/1746-6148-8-146.

Abstract

BACKGROUND

The genetic diversity of Mycoplasma agalactiae (MA) isolates collected in Spain from goats in an area with contagious agalactia (CA) was assessed using a set of validated and new molecular typing methods. Validated methods included pulsed field gel electrophoresis (PFGE), variable number of tandem repeats (VNTR) typing, and Southern blot hybridization using a set of MA DNA probes, including those for typing the vpma genes repertoire. New approaches were based on PCR and targeted genomic regions that diverged between strains as defined by in silico genomic comparisons of sequenced MA genomes.

RESULTS

Overall, the data showed that all typing tools yielded consistent results, with the VNTR analyses being the most rapid method to differentiate the MA isolates with a discriminatory ability comparable to that of PFGE and of a set of new PCR assays. All molecular typing approaches indicated that the Spanish isolates from the endemic area in Murcia were very diverse, with different clonal isolates probably restricted to separate, but geographically close, local areas.

CONCLUSIONS

The important genetic diversity of MA observed in infected goats from Spain contrasts with the overall homogeneity of the genomic background encountered in MA from sheep with CA in Southern France or Italy, suggesting that assessment of the disease status in endemic areas may require different approaches in sheep and in goats. A number of congruent sub-typing tools are now available for the differentiation of caprine isolates with comparable discriminatory powers.

摘要

背景

采用一系列经过验证和新的分子分型方法,评估了在传染性乳腺炎(CA)流行地区从西班牙山羊中分离出的无乳支原体(MA)分离株的遗传多样性。验证方法包括脉冲场凝胶电泳(PFGE)、可变数量串联重复(VNTR)分型以及使用一组 MA DNA 探针(包括 vpma 基因谱分型探针)进行 Southern 印迹杂交。新方法基于 PCR 和靶向基因组区域,这些区域在通过对测序 MA 基因组的计算机基因组比较定义的菌株之间存在差异。

结果

总体而言,数据表明所有分型工具均得出一致的结果,VNTR 分析是区分 MA 分离株的最快方法,其区分能力与 PFGE 和一组新的 PCR 检测相当。所有分子分型方法均表明,来自 Murcia 流行地区的西班牙分离株非常多样化,不同的克隆分离株可能仅限于单独但地理位置相近的局部地区。

结论

在西班牙感染山羊中观察到的 MA 重要遗传多样性与在法国南部或意大利 CA 绵羊中遇到的 MA 总体基因组背景的均一性形成鲜明对比,这表明在流行地区评估疾病状况可能需要在绵羊和山羊中采用不同的方法。现在有许多一致的亚分型工具可用于区分具有相当区分能力的山羊分离株。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5844/3514313/f350a0306255/1746-6148-8-146-1.jpg

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