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多发性骨髓瘤中候选酪氨酸激酶和RAS通路基因家族的重测序分析。

Resequencing analysis of the candidate tyrosine kinase and RAS pathway gene families in multiple myeloma.

作者信息

Hucthagowder Vishwanathan, Meyer Rekha, Mullins Chelsea, Nagarajan Rakesh, DiPersio John F, Vij Ravi, Tomasson Michael H, Kulkarni Shashikant

机构信息

Department of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO, USA.

出版信息

Cancer Genet. 2012 Sep;205(9):474-8. doi: 10.1016/j.cancergen.2012.06.007.

Abstract

Multiple myeloma (MM) is an incurable, B-cell malignancy characterized by the clonal proliferation and accumulation of malignant plasma cells in bone marrow. Despite recent advances in the understanding of genomic aberrations, a comprehensive catalogue of clinically actionable mutations in MM is just beginning to emerge. The tyrosine kinase (TK) and RAS oncogenes, which encode important regulators of various signaling pathways, are among the most frequently altered gene families in cancer. To clarify the role of TK and RAS genes in the pathogenesis of MM, we performed a systematic, targeted screening of mutations on prioritized RAS and TK genes, in CD138-sorted bone marrow specimens from 42 untreated patients. We identified a total of 24 mutations in the KRAS, PIK3CA, INSR, LTK, and MERTK genes. In particular, seven novel mutations in addition to known KRAS mutations were observed. Prediction analysis tools PolyPhen and Sorting Intolerant from Tolerant (SIFT) were used to assess the functional significance of these novel mutations. Our analysis predicted that these mutations may have a deleterious effect, resulting in the functional alteration of proteins involved in the pathogenesis of myeloma. While further investigation is needed to determine the functional consequences of these proteins, mutational testing of the RAS and TK genes in larger myeloma cohorts might also be useful to establish the recurrent nature of these mutations.

摘要

多发性骨髓瘤(MM)是一种无法治愈的B细胞恶性肿瘤,其特征是恶性浆细胞在骨髓中克隆性增殖和积聚。尽管在基因组畸变的认识方面取得了最新进展,但MM中临床可操作突变的全面目录才刚刚开始出现。酪氨酸激酶(TK)和RAS癌基因编码各种信号通路的重要调节因子,是癌症中最常发生改变的基因家族之一。为了阐明TK和RAS基因在MM发病机制中的作用,我们对42例未经治疗患者的CD138分选骨髓标本中的RAS和TK基因进行了系统的靶向突变筛查。我们在KRAS、PIK3CA、INSR、LTK和MERTK基因中总共鉴定出24个突变。特别是,除了已知的KRAS突变外,还观察到7个新突变。使用预测分析工具PolyPhen和容忍度排序不耐受(SIFT)来评估这些新突变的功能意义。我们的分析预测这些突变可能具有有害作用,导致参与骨髓瘤发病机制的蛋白质功能改变。虽然需要进一步研究来确定这些蛋白质的功能后果,但在更大的骨髓瘤队列中对RAS和TK基因进行突变检测可能也有助于确定这些突变的复发性。

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