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Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
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Molecular replacement with MOLREP.使用MOLREP进行分子置换。
Acta Crystallogr D Biol Crystallogr. 2010 Jan;66(Pt 1):22-5. doi: 10.1107/S0907444909042589. Epub 2009 Dec 21.
3
Rab GTPases as coordinators of vesicle traffic.作为囊泡运输协调因子的Rab小GTP酶
Nat Rev Mol Cell Biol. 2009 Aug;10(8):513-25. doi: 10.1038/nrm2728. Epub 2009 Jul 15.
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Phaser crystallographic software.相位结晶学软件。
J Appl Crystallogr. 2007 Aug 1;40(Pt 4):658-674. doi: 10.1107/S0021889807021206. Epub 2007 Jul 13.
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Biophysical analysis of the interaction of Rab6a GTPase with its effector domains.Rab6a GTP酶与其效应结构域相互作用的生物物理分析。
J Biol Chem. 2009 Jan 30;284(5):2628-2635. doi: 10.1074/jbc.M806003200. Epub 2008 Nov 19.
6
Rabs and their effectors: achieving specificity in membrane traffic.Rabs蛋白及其效应蛋白:实现膜泡运输的特异性
Proc Natl Acad Sci U S A. 2006 Aug 8;103(32):11821-7. doi: 10.1073/pnas.0601617103. Epub 2006 Aug 1.
7
Rab6A and Rab6A' GTPases play non-overlapping roles in membrane trafficking.Rab6A和Rab6A'小GTP酶在膜运输中发挥非重叠作用。
Traffic. 2006 Apr;7(4):394-407. doi: 10.1111/j.1600-0854.2006.00395.x.
8
A role for the Rab6A' GTPase in the inactivation of the Mad2-spindle checkpoint.Rab6A' GTP酶在Mad2纺锤体检查点失活中的作用。
EMBO J. 2006 Jan 25;25(2):278-89. doi: 10.1038/sj.emboj.7600929. Epub 2006 Jan 5.
9
Structure of the extremely slow GTPase Rab6A in the GTP bound form at 1.8A resolution.分辨率为1.8埃的结合GTP形式的极慢GTP酶Rab6A的结构。
J Struct Biol. 2005 Dec;152(3):235-8. doi: 10.1016/j.jsb.2005.10.001. Epub 2005 Nov 18.
10
Regulation of microtubule-dependent recycling at the trans-Golgi network by Rab6A and Rab6A'.Rab6A和Rab6A'对反式高尔基体网络中微管依赖性循环的调节
Mol Biol Cell. 2005 Jan;16(1):162-77. doi: 10.1091/mbc.e04-03-0260. Epub 2004 Oct 13.

Rab6A'(Q72L)的结晶及初步X射线晶体学研究:一种GTP锁定形式

Crystallization and preliminary X-ray crystallographic studies of Rab6A'(Q72L): a GTP-locked form.

作者信息

Shin Young-Cheul, Jang Tae-Ho, Yoon Jong Hwan, Jeon Ju-Hong, Park Hyun Ho

机构信息

Department of Physiology, Seoul National University College of Medicine, Seoul 110-799, Republic of Korea.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Sep 1;68(Pt 9):1077-80. doi: 10.1107/S1744309112030874. Epub 2012 Aug 31.

DOI:10.1107/S1744309112030874
PMID:22949199
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3433202/
Abstract

Rab6A, a member of the Ras superfamily of small G proteins, is involved in the regulation of vesicle trafficking, which is critical for endocytosis, cell differentiation and cell growth. Rab6A can exist in two isoforms termed Rab6A and Rab6A'. The substitution of Gln72 by Leu (Q72L) in the Rab6A family blocks GTP-hydrolysis activity, and this mutation usually causes the Rab6A protein to be in a constitutively active form. In this study, in order to understand the functional uniqueness of Rab6A' and the molecular mechanism of the control of activity by GTP and GDP from the crystal structure, a Rab6A'(Q72L) mutant form was overexpressed in Escherichia coli with an engineered N-terminal His tag. Rab6A'(Q72L) was then purified to homogeneity and crystallized at 293 K. X-ray diffraction data were collected to a resolution of 1.9 Å from a crystal belonging to space group P22(1)2(1) with unit-cell parameters a = 36.84, b = 96.78, c = 109.99 Å. The asymmetric unit was estimated to contain two molecules.

摘要

Rab6A是小G蛋白Ras超家族的成员之一,参与囊泡运输的调控,而囊泡运输对于内吞作用、细胞分化和细胞生长至关重要。Rab6A有两种亚型,分别称为Rab6A和Rab6A'。Rab6A家族中第72位的谷氨酰胺被亮氨酸取代(Q72L)会阻断GTP水解活性,这种突变通常会使Rab6A蛋白处于组成型活性形式。在本研究中,为了从晶体结构了解Rab6A'的功能独特性以及GTP和GDP对活性控制的分子机制,一种带有工程化N端His标签的Rab6A'(Q72L)突变体在大肠杆菌中过表达。然后将Rab6A'(Q72L)纯化至均一,并在293 K下结晶。从属于空间群P22(1)2(1)、晶胞参数a = 36.84、b = 96.78、c = 109.99 Å的晶体收集到分辨率为1.9 Å的X射线衍射数据。估计不对称单元包含两个分子。