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仅观察过一次的物种的分类学意义:以 Gymnodinium 属(甲藻)为例。

The taxonomic significance of species that have only been observed once: the genus Gymnodinium (Dinoflagellata) as an example.

机构信息

Center for Library and Informatics, Marine Biological Laboratory, Woods Hole, Massachusetts, United States of America.

出版信息

PLoS One. 2012;7(8):e44015. doi: 10.1371/journal.pone.0044015. Epub 2012 Aug 30.

Abstract

Taxonomists have been tasked with cataloguing and quantifying the Earth's biodiversity. Their progress is measured in code-compliant species descriptions that include text, images, type material and molecular sequences. It is from this material that other researchers are to identify individuals of the same species in future observations. It has been estimated that 13% to 22% (depending on taxonomic group) of described species have only ever been observed once. Species that have only been observed at the time and place of their original description are referred to as oncers. Oncers are important to our current understanding of biodiversity. They may be validly described species that are members of a rare biosphere, or they may indicate endemism, or that these species are limited to very constrained niches. Alternatively, they may reflect that taxonomic practices are too poor to allow the organism to be re-identified or that the descriptions are unknown to other researchers. If the latter are true, our current tally of species will not be an accurate indication of what we know. In order to investigate this phenomenon and its potential causes, we examined the microbial eukaryote genus Gymnodinium. This genus contains 268 extant species, 103 (38%) of which have not been observed since their original description. We report traits of the original descriptions and interpret them in respect to the status of the species. We conclude that the majority of oncers were poorly described and their identity is ambiguous. As a result, we argue that the genus Gymnodinium contains only 234 identifiable species. Species that have been observed multiple times tend to have longer descriptions, written in English. The styles of individual authors have a major effect, with a few authors describing a disproportionate number of oncers. The information about the taxonomy of Gymnodinium that is available via the internet is incomplete, and reliance on it will not give access to all necessary knowledge. Six new names are presented - Gymnodinium campbelli for the homonymous name Gymnodinium translucens Campbell 1973, Gymnodinium antarcticum for the homonymous name Gymnodinium frigidum Balech 1965, Gymnodinium manchuriensis for the homonymous name Gymnodinium autumnale Skvortzov 1968, Gymnodinium christenum for the homonymous name Gymnodinium irregulare Christen 1959, Gymnodinium conkufferi for the homonymous name Gymnodinium irregulare Conrad & Kufferath 1954 and Gymnodinium chinensis for the homonymous name Gymnodinium frigidum Skvortzov 1968.

摘要

分类学家的任务是对地球生物多样性进行编目和量化。他们的工作成果以符合规范的物种描述的形式呈现,包括文本、图像、模式标本和分子序列。其他研究人员正是根据这些材料来识别未来观察到的同一物种的个体。据估计,有 13%到 22%(取决于分类群)的已描述物种仅被观察过一次。仅在原始描述的时间和地点观察到的物种被称为单次出现种。单次出现种对于我们目前对生物多样性的理解很重要。它们可能是属于稀有生物界的有效描述物种,也可能表明特有性,或者这些物种仅限于非常受限的生态位。或者,它们可能反映出分类学实践过于不完善,以至于无法重新识别该生物体,或者其他研究人员不知道这些描述。如果后一种情况属实,那么我们目前对物种的统计数据将不能准确反映我们所了解的情况。为了研究这一现象及其潜在原因,我们检查了微生物原生动物属 Gymnodinium。该属包含 268 个现存物种,其中 103 种(38%)自最初描述以来未被观察到。我们报告了原始描述的特征,并根据物种的状况对其进行了解释。我们得出的结论是,大多数单次出现种的描述都很差,其身份存在歧义。因此,我们认为 Gymnodinium 属仅包含 234 种可识别的物种。多次被观察到的物种往往具有更长的描述,并且用英语书写。个别作者的风格有很大的影响,少数作者描述了不成比例的多次出现种。通过互联网提供的关于 Gymnodinium 分类学的信息并不完整,依赖它将无法获得所有必要的知识。提出了六个新名称——Gymnodinium campbelli 用于同名的 Gymnodinium translucens Campbell 1973,Gymnodinium antarcticum 用于同名的 Gymnodinium frigidum Balech 1965,Gymnodinium manchuriensis 用于同名的 Gymnodinium autumnale Skvortzov 1968,Gymnodinium christenum 用于同名的 Gymnodinium irregulare Christen 1959,Gymnodinium conkufferi 用于同名的 Gymnodinium irregulare Conrad & Kufferath 1954 和 Gymnodinium chinensis 用于同名的 Gymnodinium frigidum Skvortzov 1968。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1fa1/3431360/b83a1202f19c/pone.0044015.g001.jpg

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