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外膜蛋白A(OmpA)可以形成折叠和未折叠的寡聚体。

OmpA can form folded and unfolded oligomers.

作者信息

Wang H, Andersen K K, Vad B S, Otzen D E

机构信息

Interdisciplinary Nanoscience Center (iNANO), Center for Insoluble Protein Structures (inSPIN), Department of Molecular Biology and Genetics, University of Aarhus, Gustav Wieds Vej 14, DK-8000 Aarhus C, Denmark.

出版信息

Biochim Biophys Acta. 2013 Jan;1834(1):127-36. doi: 10.1016/j.bbapap.2012.09.002. Epub 2012 Sep 12.

Abstract

The monomeric outer membrane protein OmpA from Escherichia coli has long served as a model protein for studying the folding and membrane insertion of β-barrel membrane proteins. Here we report that when OmpA is refolded in limiting amounts of surfactant (close to the cmc), it has a high propensity to form folded and unfolded oligomers. The oligomers exist both in a folded and (partially) unfolded form which both dissociate under denaturing conditions. Oligomerization does not require the involvement of the periplasmic domain and is not strongly affected by ionic strength. The folded dimers can be isolated and show native-like secondary structure; they are resistant to proteolytic attack and do not dissociate in high surfactant concentrations, indicating high kinetic stability once formed. Remarkably, OmpA also forms significant amounts of higher order structures when refolding in the presence of lipid vesicles. We suggest that oligomerization occurs by domain swapping favored by the high local concentration of OmpA molecules congregating on the same micelle or vesicle. In this model, the unfolded oligomer is stabilized by a small number of intermolecular β-strand contacts and subsequently folds to a more stable state where these intermolecular contacts are consolidated in a native-like fashion by contacts between complementary β-strands from different molecules. Our model is supported by the ability of complementary fragments to associate with each other in vitro. Oligomerization is probably avoided in the cell by the presence of cellular chaperones which maintain the protein in a monomeric state.

摘要

来自大肠杆菌的单体外膜蛋白OmpA长期以来一直作为研究β-桶状膜蛋白折叠和膜插入的模型蛋白。在此我们报告,当OmpA在接近临界胶束浓度(cmc)的有限量表面活性剂中重折叠时,它极易形成折叠和未折叠的寡聚体。这些寡聚体以折叠形式和(部分)未折叠形式存在,且在变性条件下均会解离。寡聚化不需要周质结构域的参与,并且不受离子强度的强烈影响。折叠的二聚体可以分离出来,并显示出类似天然的二级结构;它们对蛋白水解攻击具有抗性,并且在高表面活性剂浓度下不会解离,表明一旦形成就具有高动力学稳定性。值得注意的是,当在脂质囊泡存在下重折叠时,OmpA还会形成大量的高阶结构。我们认为寡聚化是通过结构域交换发生的,同一胶束或囊泡上聚集的OmpA分子的高局部浓度有利于这种交换。在这个模型中,未折叠的寡聚体通过少量分子间β链接触而稳定,随后折叠成更稳定的状态,在这种状态下,这些分子间接触通过来自不同分子的互补β链之间的接触以类似天然的方式巩固。我们的模型得到了互补片段在体外相互结合能力的支持。细胞中可能存在分子伴侣,使蛋白质保持单体状态,从而避免了寡聚化。

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