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肽键的单次水合作用:以 Vince 内酰胺为例。

Single hydration of the peptide bond: the case of the Vince lactam.

机构信息

Departamento de Química Física, Facultad de Ciencia y Tecnología, Universidad del País Vasco (UPV/EHU), Campus de Leioa, Ap. 644, E-48080 Bilbao, Spain.

出版信息

J Phys Chem A. 2012 Oct 18;116(41):10099-106. doi: 10.1021/jp3072734. Epub 2012 Oct 4.

Abstract

2-Azabicyclo[2.2.1]hept-5-en-3-one (ABH or Vince lactam) and its monohydrated complex (ABH···H(2)O) have been observed in a supersonic jet by Fourier transform microwave spectroscopy. ABH is broadly used in the synthesis of therapeutic drugs, whereas the ABH···H(2)O system offers a simple model to explain the conformational preferences of water linked to a constrained peptidic bond. A single predominant form of the Vince lactam and its singly hydrated complex have been detected, determining the rotational constants, centrifugal distortion constants, and nuclear quadrupole coupling tensor. The monohydrated complex is stabilized by two hydrogen bonds (C═O···H-O and N-H···O) closing a six-membered ring. The complexation energy has been estimated to be ∼10 kJ mol(-1) from experimental results. In addition, the observed structure in the gas phase has been compared with solid-phase diffraction data. The structural parameters and binding energies of ABH···H(2)O have also been compared with similar molecules containing peptide bonds. Ab initio (MP2) and density functional (M06-2X and B3LYP) methods have supported the experimental work, describing the rotational parameters and conformational landscape of the title compound and its singly hydrated complex.

摘要

2-氮杂双环[2.2.1]庚-5-烯-3-酮(ABH 或文斯内酯)及其一水复合物(ABH···H(2)O)已通过傅里叶变换微波光谱在超音速射流中观察到。ABH 广泛用于治疗药物的合成,而 ABH···H(2)O 体系提供了一个简单的模型来解释与约束肽键相连的水的构象偏好。已经检测到文斯内酯的单一主要形式及其单水合复合物,确定了旋转常数、离心扭曲常数和核四极耦合张量。一水复合物通过两个氢键(C=O···H-O 和 N-H···O)稳定,形成一个六元环。通过实验结果估算出复合物的结合能约为 10 kJ mol(-1)。此外,还将气相中观察到的结构与固相衍射数据进行了比较。还比较了 ABH···H(2)O 的结构参数和结合能与含有肽键的类似分子。从头算(MP2)和密度泛函(M06-2X 和 B3LYP)方法支持了实验工作,描述了标题化合物及其单水合复合物的旋转参数和构象景观。

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