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疾病特异性数据库:我们为何需要它们以及 2011 年 5 月 28 日人类变异组计划会议的一些建议。

Disease-specific databases: why we need them and some recommendations from the Human Variome Project Meeting, May 28, 2011.

机构信息

Human Variome Project, Florey Neurosciences Institute, Carlton, Victoria, Australia.

出版信息

Am J Med Genet A. 2012 Nov;158A(11):2763-6. doi: 10.1002/ajmg.a.35392. Epub 2012 Sep 18.

Abstract

The need for Locus-Specific Databases, with disease-specific experts and curators, is an essential ingredient in a process to enable the benefits of the advances in sequencing and mutational analysis to be realized across the genome. Next generation sequencing provides both astounding opportunities and challenges, especially for genetic counsellors. An approach coordinated at a genome wide, international level, supported by well-organized disease-specific respected organizations is a model most likely to be successful, but committed resourceful professionals working in local poorly resourced environments can make valuable contributions that can grow. Bioinformatic tools to sift and integrate multiple domains of information are being developed, and play a major part in meeting the challenges. Regulation of providers, including a requirement for them to submit mutational information to central databases, also should assist to reach the goals needed to realize the opportunities. There is also a need to agree on governance of Locus-Specific Databases (LSDBs) at an international level, and for adequate international funding to support this need, to ensure humanity reaps the benefits of the current molecular genetic revolution. The Human Variome Project offers this, working also with the other major initiatives with similar objectives. This report concludes with Recommendations for the Human Variome Project stemming from the presentations and discussions at the meeting.

摘要

需要特定位置数据库,由具有疾病特异性的专家和策展人组成,这是一个过程的重要组成部分,该过程使测序和突变分析方面的进步能够在整个基因组中实现。下一代测序技术提供了令人惊讶的机会和挑战,特别是对遗传咨询师而言。在基因组范围内,由有组织的疾病特异性组织支持的协调方法是最有可能成功的模式,但在资源匮乏的本地环境中工作的有决心的有才能的专业人员也可以做出有价值的贡献,这些贡献可以不断发展。用于筛选和整合多个信息领域的生物信息学工具正在开发中,并在应对挑战方面发挥着重要作用。还应规定提供者进行监管,包括要求他们将突变信息提交给中央数据库,以帮助实现实现这些机会所需的目标。还需要在国际层面上就特定位置数据库(LSDB)的治理达成一致,并提供足够的国际资金来支持这一需求,以确保人类能够从当前的分子遗传学革命中受益。人类变异组计划提供了这一点,该计划还与具有类似目标的其他主要倡议合作。本报告最后提出了人类变异组计划的建议,这些建议源自会议的演示和讨论。

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