Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, BC V6T 1Z3, Canada.
Biochemistry. 2012 Oct 16;51(41):8278-92. doi: 10.1021/bi3010279. Epub 2012 Oct 2.
Lipopolysaccharide α-1,4-galactosyltransferase C (LgtC) from Neisseria meningitidis is responsible for a key step in lipooligosaccharide biosynthesis involving the transfer of α-galactose from the sugar donor UDP-galactose to a terminal acceptor lactose. Crystal structures of the complexes of LgtC with Mn(2+) and the sugar donor analogue UDP-2-deoxy-2-fluorogalactose in the absence and presence of the sugar acceptor analogue 4'-deoxylactose provided key insights into the galactosyl-transfer mechanism. Combined with kinetic analyses, the enzymatic mechanism of LgtC appears to involve a "front-side attack" S(N)i-like mechanism with a short-lived oxocarbenium-phosphate ion pair intermediate. As a prerequisite for investigating the required roles of structural dynamics in this catalytic mechanism by nuclear magnetic resonance techniques, the transverse relaxation-optimized amide (15)N heteronuclear single-quantum correlation and methyl (13)C heteronuclear multiple-quantum correlation spectra of LgtC in its apo, substrate analogue, and product complexes were partially assigned. This was accomplished using a suite of complementary spectroscopic approaches, combined with selective isotopic labeling and mutagenesis of all the isoleucine residues in the protein. Only ~70% of the amide signals could be detected, whereas more than the expected number of methyl signals were observed, indicating that LgtC adopts multiple interconverting conformational states. Chemical shift perturbation mapping provided insights into substrate and product binding, including the demonstration that the sugar donor analogue (UDP-2FGal) associates with LgtC only in the presence of a metal ion (Mg(2+)). These spectral assignments provide the foundation for detailed studies of the conformational dynamics of LgtC.
脑膜炎奈瑟菌的脂多糖α-1,4-半乳糖基转移酶 C(LgtC)负责脂寡糖生物合成中的一个关键步骤,涉及从供体 UDP-半乳糖将α-半乳糖转移到末端受体乳糖。LgtC 与 Mn(2+)和糖供体类似物 UDP-2-脱氧-2-氟半乳糖复合物的晶体结构以及在糖受体类似物 4'-去氧乳糖存在和不存在的情况下提供了半乳糖基转移机制的关键见解。结合动力学分析,LgtC 的酶促机制似乎涉及具有短暂的氧碳翁-磷酸离子对中间体的“正面攻击” S(N)i 样机制。作为通过核磁共振技术研究这种催化机制中结构动力学所需作用的前提条件,部分分配了 LgtC 在apo、底物类似物和产物复合物中的横向弛豫优化酰胺(15)N 异核单量子相关和甲基(13)C 异核多量子相关谱。这是通过使用一系列互补的光谱方法来完成的,结合了对蛋白质中所有异亮氨酸残基的选择性同位素标记和突变。只能检测到约 70%的酰胺信号,而观察到的甲基信号数量超过预期,表明 LgtC 采用多种相互转化的构象状态。化学位移扰动映射提供了对底物和产物结合的深入了解,包括证明糖供体类似物(UDP-2FGal)仅在存在金属离子(Mg(2+))时才与 LgtC 结合。这些光谱分配为 LgtC 的构象动力学的详细研究提供了基础。