Mehraeen Shafigh, Spakowitz Andrew J
Department of Mechanical Engineering, Stanford University, Stanford, California 94305, USA.
Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Aug;86(2 Pt 1):021902. doi: 10.1103/PhysRevE.86.021902. Epub 2012 Aug 2.
We build a theoretical platform for predicting the behavior of tethered-bead single-molecule experiments, accounting for bead translational and rotational fluctuations, the specific type of experimental setup, and the detailed application of tension to the tether molecule. Within this framework, the external force applied to the bead is distinguished from the instantaneous force transduced to the tether molecule, resulting in a distinction between the observable response of the bead and the underlying force fluctuations felt by the tether that directly affect the biomolecular processes being studied. Our theoretical model indicates that the spread of the distribution of tether forces increases with applied external force, resulting in substantial deviations between the external and tether forces. We find that the impact of rotational and translational fluctuations of the bead motion is larger in magnetic tweezers than optical tweezers. However, this distinction diminishes at large external forces, and our asymptotic expressions offer a simple route for experimental analyses. Overall, our theory demonstrates that fluctuations in the tether molecule due to bead rotation and translation lead to a broad range of tether forces.
我们构建了一个理论平台,用于预测系链珠单分子实验的行为,该平台考虑了珠子的平移和旋转波动、实验装置的具体类型以及对系链分子施加张力的详细情况。在此框架内,施加于珠子的外力与传递到系链分子的瞬时力有所不同,这导致珠子的可观测响应与系链所感受到的直接影响正在研究的生物分子过程的潜在力波动之间存在差异。我们的理论模型表明,系链力分布的展宽随施加的外力增加而增大,导致外力与系链力之间存在显著偏差。我们发现,在磁镊中珠子运动的旋转和平移波动的影响比在光镊中更大。然而,这种差异在大外力作用下会减小,我们的渐近表达式为实验分析提供了一条简单途径。总体而言,我们的理论表明,由于珠子的旋转和平移导致的系链分子波动会产生广泛的系链力。