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基于 DNA 条形码的 Indo-West 太平洋平头鱼类(鲉形目:平头鱼科)隐匿多样性研究

Cryptic diversity in flathead fishes (Scorpaeniformes: Platycephalidae) across the Indo-West Pacific uncovered by DNA barcoding.

机构信息

Institute for Marine and Antarctic Studies, University of Tasmania, Australia.

出版信息

Mol Ecol Resour. 2013 Jan;13(1):32-42. doi: 10.1111/1755-0998.12022. Epub 2012 Sep 25.

Abstract

Identification of taxonomical units underpins most biological endeavours ranging from accurate biodiversity estimates to the effective management of sustainably harvested, protected or endangered species. Successful species identification is now frequently based on a combination of approaches including morphometrics and DNA markers. Sequencing of the mitochondrial COI gene is an established methodology with an international campaign directed at barcoding all fishes. We employed COI sequencing alongside traditional taxonomic identification methods and uncovered instances of deep intraspecific genetic divergences among flathead species. Sixty-five operational taxonomic units (OTUs) were observed across the Indo-West Pacific from just 48 currently recognized species. The most comprehensively sampled taxon, Platycephalus indicus, exhibited the highest levels of genetic diversity with eight lineages separated by up to 16.37% genetic distance. Our results clearly indicate a thorough reappraisal of the current taxonomy of P. indicus (and its three junior synonyms) is warranted in conjunction with detailed taxonomic work on the other additional Platycephalidae OTUs detected by DNA barcoding.

摘要

分类单元的鉴定是大多数生物学研究的基础,从准确的生物多样性估计到可持续收获、保护或濒危物种的有效管理。如今,成功的物种鉴定通常基于多种方法的结合,包括形态计量学和 DNA 标记。线粒体 COI 基因测序是一种成熟的方法,国际上已经开展了一项针对所有鱼类的条形码计划。我们结合 COI 测序和传统的分类鉴定方法,发现了平头鱼物种之间存在深层次的种内遗传分歧。在印度-西太平洋地区,仅从 48 种目前公认的物种中就观察到了 65 个分类单元 (OTUs)。被采样最全面的平鳍鳅科鱼类,印度平鳍鳅,表现出最高的遗传多样性,有 8 个谱系的遗传距离相差高达 16.37%。我们的研究结果清楚地表明,有必要对目前的印度平鳍鳅(及其三个同物异名)的分类进行全面重新评估,同时结合 DNA 条形码检测到的其他额外平鳍鳅科分类单元的详细分类工作。

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