Institut für Biologischen Pflanzenschutz, Julius Kühn-Institut, Darmstadt, Germany.
Curr Microbiol. 2013 Jan;66(1):1-9. doi: 10.1007/s00284-012-0219-z. Epub 2012 Sep 25.
Wireworms, the polyphagous larvae of click beetles belonging to the genus Agriotes (Coleoptera: Elateridae) are severe and widespread agricultural pests that affect numerous crops globally. A new bacterial specimen identified in diseased wireworms had previously been shown by microscopy and 16S ribosomal RNA (rRNA) gene-based phylogenetic reconstruction to belong to the taxonomic genus Rickettsiella (Gammaproteobacteria) that comprises intracellular bacteria associated with and typically pathogenic for a wide range of arthropods. Going beyond these earlier results obtained from rRNA phylogenies, multilocus sequence analysis (MLSA) using a four marker scheme has been employed in the molecular taxonomic characterization of the new Rickettsiella pathotype, referred to as 'Rickettsiella agriotidis'. In combination with likelihood-based significance testing, the MLSA approach demonstrated the close phylogenetic relationship of 'R. agriotidis' to the pathotypes 'Rickettsiella melolonthae' and 'Rickettsiella tipulae', i.e., subjective synonyms of the nomenclatural type species, Rickettsiella popilliae. 'R. agriotidis' forms, therefore, part of a Rickettsiella pathotype complex that most likely represents the species R. popilliae. As there are currently no genetic data available from the R. popilliae type strain, the respective assignment cannot be corroborated directly. However, an alternative taxonomic assignment to the species Rickettsiella grylli has been positively ruled out by significance testing. MLSA has been shown to provide a more powerful tool for taxonomic delineation within the genus Rickettsiella as compared to 16S rRNA phylogenetics. However, the limitations of the present MLSA scheme for the sub-species level classification of 'R. agriotidis' and further R. popilliae synonyms has been critically evaluated.
钢丝虫,也就是沟叩头甲属的多食性幼虫(鞘翅目:叩头甲科),是一种严重且广泛分布的农业害虫,会影响全球许多农作物。先前通过显微镜观察和基于 16S 核糖体 RNA(rRNA)基因的系统发育重建发现,一种在患病钢丝虫中鉴定出的新型细菌标本属于分类上的瑞氏杆菌属(γ变形菌),该属包含与多种节肢动物相关且通常具有致病性的细胞内细菌。超越这些先前基于 rRNA 系统发育获得的结果,使用四标记方案的多位点序列分析(MLSA)已被用于新的瑞氏杆菌病原型的分子分类特征描述,称为“瑞氏杆菌钢丝虫”。结合基于似然的显著性检验,MLSA 方法证明了“R. agriotidis”与“Rickettsiella melolonthae”和“Rickettsiella tipulae”(即命名模式种 Rickettsiella popilliae 的主观同义词)的密切系统发育关系。因此,“R. agriotidis”形式是瑞氏杆菌病原型复合体的一部分,该复合体很可能代表了 R. popilliae 物种。由于目前没有来自 R. popilliae 模式株的遗传数据,因此无法直接证实相应的归属。然而,通过显著性检验已排除将其归入蟋蟀瑞氏杆菌的替代分类。与 16S rRNA 系统发育相比,MLSA 已被证明是瑞氏杆菌属内分类划定的更强大工具。然而,本研究中 MLSA 方案对于“R. agriotidis”和进一步的 R. popilliae 同义词的亚种水平分类的局限性已受到批判性评估。