• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

甘露聚糖酶的结构分析及其钙结合位点对热稳定性的作用。

The structural analysis and the role of calcium binding site for thermal stability in mannanase.

机构信息

Okayama Prefectural Technology Center for Agriculture, Forestry and Fisheries, Research Institute for Biological Sciences, 7549-1 Kibichuo-cho, Kaga-gun, Okayama 716-1241, Japan.

出版信息

Biochimie. 2012 Dec;94(12):2783-90. doi: 10.1016/j.biochi.2012.09.012. Epub 2012 Sep 23.

DOI:10.1016/j.biochi.2012.09.012
PMID:23009928
Abstract

Mannanase is an important enzyme involved in the degradation of mannan, production of bioactive oligosaccharides, and biobleaching of kraft pulp. Mannanase must be thermostable for use in industrial applications. In a previous study, we found that the thermal stability of mannanase from Streptomyces thermolilacinus (StMan) and Thermobifida fusca (TfMan) is enhanced by calcium. Here, we investigated the relationship between the three-dimensional structure and primary sequence to identify the putative calcium-binding site. The results of site-directed mutagenesis experiments indicated that Asp-285, Glu-286, and Asp-287 of StMan (StDEDAAAdC) and Asp-264, Glu-265, and Asp-266 of TfMan (TfDEDAAAdC) were the key residues for calcium binding affinity. Isothermal titration calorimetry revealed that the catalytic domain of StMan and TfMan (StMandC and TfMandC, respectively) bound calcium with a K(a) of 3.02 × 10(4) M(-1) and 1.52 × 10(4) M(-1), respectively, both with stoichiometry consistent with one calcium-binding site per molecule of enzyme. Non-calcium-binding mutants (StDEDAAAdC and TfDEDAAAdC) did not show any calorimetric change. From the primary structure alignment of several mannanases, the calcium-binding site was found to be highly conserved in GH5 bacterial mannanases. This is the first study indicating enhanced thermal stability of GH5 bacterial mannanases by calcium binding.

摘要

甘露聚糖酶是一种重要的酶,参与甘露聚糖的降解、生物活性寡糖的生产和硫酸盐浆的生物漂白。甘露聚糖酶必须具有热稳定性才能用于工业应用。在之前的研究中,我们发现嗜热链霉菌(StMan)和嗜热纤维单胞菌(TfMan)的甘露聚糖酶的热稳定性通过钙得到增强。在这里,我们研究了三维结构和一级序列之间的关系,以确定可能的钙结合位点。定点突变实验的结果表明,StMan 的 Asp-285、Glu-286 和 Asp-287(StDEDAAAdC)和 TfMan 的 Asp-264、Glu-265 和 Asp-266(TfDEDAAAdC)是钙结合亲和力的关键残基。等温滴定量热法表明,StMan 和 TfMan 的催化结构域(StMandC 和 TfMandC)分别以 3.02×10^4 M^(-1)和 1.52×10^4 M^(-1)的 K(a)值结合钙,其化学计量学与每个酶分子结合一个钙结合位点一致。非钙结合突变体(StDEDAAAdC 和 TfDEDAAAdC)没有显示任何量热变化。从几种甘露聚糖酶的一级结构比对中发现,钙结合位点在 GH5 细菌甘露聚糖酶中高度保守。这是首次表明 GH5 细菌甘露聚糖酶通过钙结合增强热稳定性的研究。

相似文献

1
The structural analysis and the role of calcium binding site for thermal stability in mannanase.甘露聚糖酶的结构分析及其钙结合位点对热稳定性的作用。
Biochimie. 2012 Dec;94(12):2783-90. doi: 10.1016/j.biochi.2012.09.012. Epub 2012 Sep 23.
2
Characterization of calcium ion sensitive region for β-mannanase from Streptomyces thermolilacinus.嗜热栖热放线菌β-甘露聚糖酶钙离子敏感区域的表征
Biochim Biophys Acta. 2011 Sep;1814(9):1127-33. doi: 10.1016/j.bbapap.2011.04.017. Epub 2011 May 12.
3
The loop structure of Actinomycete glycoside hydrolase family 5 mannanases governs substrate recognition.放线菌糖苷水解酶家族 5 甘露聚糖酶的环结构决定了其对底物的识别。
FEBS J. 2015 Oct;282(20):4001-14. doi: 10.1111/febs.13401. Epub 2015 Sep 20.
4
From structure to function: insights into the catalytic substrate specificity and thermostability displayed by Bacillus subtilis mannanase BCman.从结构到功能:对枯草芽孢杆菌甘露聚糖酶BCman所展现的催化底物特异性和热稳定性的见解
J Mol Biol. 2008 Jun 6;379(3):535-44. doi: 10.1016/j.jmb.2008.03.068. Epub 2008 Apr 7.
5
Molecular insights into the mechanism of thermal stability of actinomycete mannanase.放线菌甘露聚糖酶热稳定性机制的分子见解
FEBS Lett. 2016 Sep;590(17):2862-9. doi: 10.1002/1873-3468.12322. Epub 2016 Aug 23.
6
Identification of catalytic bases in the active site of Escherichia coli methylglyoxal synthase: cloning, expression, and functional characterization of conserved aspartic acid residues.大肠杆菌甲基乙二醛合酶活性位点催化碱基的鉴定:保守天冬氨酸残基的克隆、表达及功能表征
Biochemistry. 1998 Jul 14;37(28):10074-86. doi: 10.1021/bi980409p.
7
Binding of bivalent ions to actinomycete mannanase is accompanied by conformational change and is a key factor in its thermal stability.二价离子与放线菌甘露聚糖酶的结合伴随着构象变化,并且是其热稳定性的关键因素。
Biochim Biophys Acta. 2013 Jan;1834(1):301-7. doi: 10.1016/j.bbapap.2012.08.011. Epub 2012 Aug 17.
8
Molecular insights into substrate specificity and thermal stability of a bacterial GH5-CBM27 endo-1,4-β-D-mannanase.细菌 GH5-CBM27 内切 1,4-β-D-甘露聚糖酶的底物特异性和热稳定性的分子见解。
J Struct Biol. 2012 Feb;177(2):469-76. doi: 10.1016/j.jsb.2011.11.021. Epub 2011 Dec 3.
9
[Recent advances and prospect on structural biology of beta-mannanase--a review].β-甘露聚糖酶结构生物学的研究进展与展望——综述
Wei Sheng Wu Xue Bao. 2009 Sep;49(9):1131-7.
10
Identification of a calcium binding site in Staphylococcus hyicus lipase: generation of calcium-independent variants.猪葡萄球菌脂肪酶中钙结合位点的鉴定:钙非依赖性变体的产生
Biochemistry. 1999 Jan 5;38(1):2-10. doi: 10.1021/bi981869l.

引用本文的文献

1
Yeast cell wall mannan structural features, biological activities, and production strategies.酵母细胞壁甘露聚糖的结构特征、生物活性及生产策略。
Heliyon. 2024 Mar 8;10(6):e27896. doi: 10.1016/j.heliyon.2024.e27896. eCollection 2024 Mar 30.
2
Conserved Calcium-Binding Residues at the Ca-I Site Involved in Fructooligosaccharide Synthesis by 121 Inulosucrase.参与121菊粉蔗糖酶合成低聚果糖的Ca-I位点上保守的钙结合残基。
ACS Omega. 2020 Oct 20;5(43):28001-28011. doi: 10.1021/acsomega.0c03521. eCollection 2020 Nov 3.
3
A surface-exposed GH26 β-mannanase from : Structure, role, and phylogenetic analysis of Man26B.
一个来自:结构、功能和系统发生分析的 GH26 β-甘露聚糖酶 Man26B 的表面暴露。
J Biol Chem. 2019 Jun 7;294(23):9100-9117. doi: 10.1074/jbc.RA118.007171. Epub 2019 Apr 18.
4
Ig-like Domain in Endoglucanase Cel9A from Alicyclobacillus acidocaldarius Makes Dependent the Enzyme Stability on Calcium.嗜酸嗜热栖热放线菌内切葡聚糖酶Cel9A中的免疫球蛋白样结构域使该酶的稳定性依赖于钙。
Mol Biotechnol. 2018 Sep;60(9):698-711. doi: 10.1007/s12033-018-0105-4.
5
Cloning, Expression and Biochemical Characterization of Endomannanases from Thermobifida Species Isolated from Different Niches.从不同生态位分离的嗜热栖热放线菌内切甘露聚糖酶的克隆、表达及生化特性分析
PLoS One. 2016 May 25;11(5):e0155769. doi: 10.1371/journal.pone.0155769. eCollection 2016.
6
Polarity Alteration of a Calcium Site Induces a Hydrophobic Interaction Network and Enhances Cel9A Endoglucanase Thermostability.钙位点的极性改变诱导疏水相互作用网络并增强Cel9A内切葡聚糖酶的热稳定性。
Appl Environ Microbiol. 2016 Jan 4;82(6):1662-1674. doi: 10.1128/AEM.03326-15.
7
Biochemical properties and atomic resolution structure of a proteolytically processed β-mannanase from cellulolytic Streptomyces sp. SirexAA-E.来自纤维素分解链霉菌SirexAA-E的经蛋白水解处理的β-甘露聚糖酶的生化特性及原子分辨率结构
PLoS One. 2014 Apr 7;9(4):e94166. doi: 10.1371/journal.pone.0094166. eCollection 2014.
8
Truncation of a mannanase from Trichoderma harzianum improves its enzymatic properties and expression efficiency in Trichoderma reesei.内切甘露聚糖酶的截短提高了其在里氏木霉中的酶学性质和表达效率。
J Ind Microbiol Biotechnol. 2014 Jan;41(1):125-33. doi: 10.1007/s10295-013-1359-2. Epub 2013 Oct 27.