CITAB - Departamento de Biologia e Ambiente, Universidade de Trás-os-Montes e Alto Douro, Vila Real, Portugal.
Comput Methods Programs Biomed. 2013 Jan;109(1):26-31. doi: 10.1016/j.cmpb.2012.08.017. Epub 2012 Sep 27.
Enzyme kinetic parameters are usually determined from initial rates nevertheless, laboratory instruments only measure substrate or product concentration versus reaction time (progress curves). To overcome this problem we present a methodology which uses integrated models based on Michaelis-Menten equation. The most severe practical limitation of progress curve analysis occurs when the enzyme shows a loss of activity under the chosen assay conditions. To avoid this problem it is possible to work with the same experimental points utilized for initial rates determination. This methodology is illustrated by the use of integrated kinetic equations with the well-known reaction catalyzed by alkaline phosphatase enzyme. In this work nonlinear regression was performed with the Solver supplement (Microsoft Office Excel). It is easy to work with and track graphically the convergence of SSE (sum of square errors). The diagnosis of enzyme inhibition was performed according to Akaike information criterion.
酶动力学参数通常是根据初始速率来确定的,但实验室仪器只能测量底物或产物浓度随时间的变化(即进度曲线)。为了克服这个问题,我们提出了一种使用基于米氏方程的积分模型的方法。当酶在所选测定条件下失去活性时,进度曲线分析会遇到最严重的实际限制。为了避免这个问题,可以使用与初始速率测定相同的实验点。通过使用碱性磷酸酶催化的众所周知的反应的积分动力学方程来说明这种方法。在这项工作中,使用了 Microsoft Office Excel 的 Solver 补充功能进行非线性回归。它易于使用,并可以通过图形方式跟踪 SSE(平方和误差)的收敛。根据赤池信息量准则进行酶抑制的诊断。