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在天然产物生物合成中定制作用于载体蛋白连接底物的酶。

Tailoring enzymes acting on carrier protein-tethered substrates in natural product biosynthesis.

作者信息

Lin Shuangjun, Huang Tingting, Shen Ben

机构信息

The State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, PR China.

出版信息

Methods Enzymol. 2012;516:321-43. doi: 10.1016/B978-0-12-394291-3.00008-3.

Abstract

Carrier proteins (CPs) are integral components of fatty acid synthases, polyketide synthases, and nonribosomal peptide synthetases and play critical roles in the biosynthesis of fatty acids, polyketides, and nonribosomal peptides. An emerging role CPs play in natural product biosynthesis involves tailoring enzymes that act on CP-tethered substrates. These enzymes provide a new opportunity to engineer natural product diversity by exploiting CPs to increase substrate promiscuity for the tailoring steps. This chapter describes protocols for in vitro biochemical characterization of SgcC3 and SgcC that catalyze chlorination and hydroxylation of SgcC2-tethered (S)-β-tyrosine and analogues in the biosynthesis of the enediyne chromophore of the chromoprotein C-1027. These protocols are applicable to mechanistic characterization and engineered exploitation of other tailoring enzymes that act on CP-tethered substrates in natural product biosynthesis and structural diversification. The ultimate goal is to use the in vitro findings to guide in vivo engineering of designer natural products.

摘要

载体蛋白(CPs)是脂肪酸合酶、聚酮化合物合酶和非核糖体肽合成酶的重要组成部分,在脂肪酸、聚酮化合物和非核糖体肽的生物合成中发挥关键作用。CPs在天然产物生物合成中发挥的一个新作用涉及作用于CP连接底物的修饰酶。这些酶通过利用CPs增加修饰步骤的底物混杂性,为改造天然产物多样性提供了新机会。本章描述了SgcC3和SgcC体外生化特性的实验方案,它们在生色蛋白C-1027的烯二炔发色团生物合成中催化CP连接的(S)-β-酪氨酸及其类似物的氯化和羟基化反应。这些实验方案适用于对天然产物生物合成和结构多样化中作用于CP连接底物的其他修饰酶进行机理表征和工程利用。最终目标是利用体外研究结果指导设计型天然产物的体内工程改造。

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