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[黄曲霉临床分离株的基因分型及其与某肿瘤血液学中心环境分离株的关系]

[Genotyping of clinical isolates of Aspergillus flavus and its relationship with environmental isolates of an oncohematological center].

作者信息

Refojo Nicolás, Duarte-Escalante Esperanza, Dignani María Cecilia, Hevia Alejandra I, Abrantes Rubén A, Davel Graciela, Canteros Cristina, Frías de León María Guadalupe, Acosta-Altamirano Gustavo, Zúñiga Gerardo, Reyes-Montes María del Rocío

机构信息

Departamento de Micología, INEI ANLIS Dr. Carlos G. Malbrán, Buenos Aires, Argentina.

出版信息

Rev Iberoam Micol. 2013 Jan 3;30(1):25-30. doi: 10.1016/j.riam.2012.09.004. Epub 2012 Oct 2.

Abstract

BACKGROUND

During 4 months, and while conducting an environmental sampling of air, 2 cases of aspergillosis by Aspergillus flavus (A. flavus) were diagnosed at an oncohematological center in Buenos Aires, Argentina.

AIMS

The aim of this study was to know the variability and the genetic relationship between the clinical and environmental isolates, obtained in the oncohematological center.

METHODS

Two genotyping techniques of different discriminatory power (RAPD and AFLP) were used. A genetic similarity matrix was calculated using Jaccard method and was the basis for the construction of a dendrogram by UPGMA. The level of genetic variability was assessed by measuring the percentage of polymorphic loci, number of effective allele, expected heterocygozity and association index test (I(A)).

RESULTS

The dendrogram reveals that the A. flavus isolates recovered from the patients were not genetically related to those gotten from the rooms occupied by the patients. The environmental isolates had higher values of genetic diversity than the clinical isolates. The I(A) estimated for all the isolates suggest that recombination events occurred.

CONCLUSIONS

Patients 1 and 2 were not infected with isolates from the nosocomial environment. Clinical and environmental isolates of A. flavus showed high genetic variability among them.

摘要

背景

在4个月的时间里,阿根廷布宜诺斯艾利斯的一家肿瘤血液学中心在进行空气环境采样时,诊断出2例由黄曲霉引起的曲霉病。

目的

本研究的目的是了解在该肿瘤血液学中心获得的临床分离株和环境分离株之间的变异性和遗传关系。

方法

使用了两种具有不同鉴别能力的基因分型技术(随机扩增多态性DNA和扩增片段长度多态性)。使用Jaccard方法计算遗传相似性矩阵,并以此为基础通过非加权组平均法构建树状图。通过测量多态性位点的百分比、有效等位基因数、预期杂合度和关联指数检验(I(A))来评估遗传变异水平。

结果

树状图显示,从患者身上分离出的黄曲霉菌株与从患者居住房间中获得的菌株没有遗传关系。环境分离株的遗传多样性值高于临床分离株。对所有分离株估计的I(A)表明发生了重组事件。

结论

患者1和患者2并非感染了来自医院环境的分离株。黄曲霉的临床分离株和环境分离株之间表现出高度的遗传变异性。

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