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在自身免疫的系统免疫范式中,将 GWAS 结果与基因表达相协调。

Coordinating GWAS results with gene expression in a systems immunologic paradigm in autoimmunity.

机构信息

Division of Genetics, Brigham and Women's Hospital, Boston, MA 02115, USA.

出版信息

Curr Opin Immunol. 2012 Oct;24(5):544-51. doi: 10.1016/j.coi.2012.09.002. Epub 2012 Oct 3.

DOI:10.1016/j.coi.2012.09.002
PMID:23040211
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3489007/
Abstract

There has been considerable progress in our understanding of the genetic architecture of susceptibility to inflammatory diseases in recent years: several hundred susceptibility loci have been discovered in genome-wide association studies (GWAS) of human populations. This success has created an important challenge in identifying the functional consequences of these risk-associated variants and in elucidating how the repercussions of individual susceptibility loci integrate to yield dysregulation of immune pathways and, ultimately, syndromic clinical phenotypes. The integration of GWAS association signals with high-resolution transcriptome and other genomic data that capture the dynamics of cellular state and function in the context of individual's collection of susceptibility alleles has proven to be a successful avenue of investigation. The rapid pace of methodological development in this area has been coupled with an accumulation of experimental data that makes the elucidation of complex biological networks underlying susceptibility to these common inflammatory diseases a reasonable goal in the near future.

摘要

近年来,我们对炎症性疾病易感性的遗传结构有了相当大的了解:在人类群体的全基因组关联研究(GWAS)中发现了数百个易感位点。这一成功为识别这些风险相关变体的功能后果以及阐明个体易感性位点的影响如何整合以导致免疫途径失调,并最终导致综合征临床表型带来了重要挑战。将 GWAS 关联信号与高分辨率转录组和其他基因组数据相结合,这些数据可以捕获个体易感等位基因集合背景下细胞状态和功能的动态,已被证明是一种成功的研究途径。该领域方法学发展的快速步伐伴随着实验数据的积累,使得阐明这些常见炎症性疾病易感性背后的复杂生物学网络成为近期内一个合理的目标。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8069/3489007/ec339bb6e2c9/nihms-412359-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8069/3489007/ec339bb6e2c9/nihms-412359-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8069/3489007/ec339bb6e2c9/nihms-412359-f0001.jpg

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本文引用的文献

1
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2
Brain expression genome-wide association study (eGWAS) identifies human disease-associated variants.脑表达全基因组关联研究(eGWAS)鉴定与人类疾病相关的变异。
PLoS Genet. 2012;8(6):e1002707. doi: 10.1371/journal.pgen.1002707. Epub 2012 Jun 7.
3
Patterns of cis regulatory variation in diverse human populations.不同人类群体中顺式调控变异的模式。
Proc Natl Acad Sci U S A. 2017 Sep 12;114(37):E7841-E7850. doi: 10.1073/pnas.1707375114. Epub 2017 Aug 29.
4
Pathophysiology of T follicular helper cells in humans and mice.人类和小鼠中T滤泡辅助细胞的病理生理学
Nat Immunol. 2015 Feb;16(2):142-52. doi: 10.1038/ni.3054.
5
Cellular dissection of psoriasis for transcriptome analyses and the post-GWAS era.银屑病的细胞剖析用于转录组分析和 GWAS 后时代。
BMC Med Genomics. 2014 May 22;7:27. doi: 10.1186/1755-8794-7-27.
6
Interindividual variation in human T regulatory cells.个体间人类 T 调节细胞的差异。
Proc Natl Acad Sci U S A. 2014 Mar 25;111(12):E1111-20. doi: 10.1073/pnas.1401343111. Epub 2014 Mar 7.
7
The dendritic cell response to classic, emerging, and homeostatic danger signals. Implications for autoimmunity.树突状细胞对经典、新兴和内稳态危险信号的反应。对自身免疫的影响。
Front Immunol. 2013 Jun 10;4:138. doi: 10.3389/fimmu.2013.00138. eCollection 2013.
8
An inflection point in gene discovery efforts for neurodegenerative diseases: from syndromic diagnoses toward endophenotypes and the epigenome.神经退行性疾病基因发现工作的转折点:从综合征诊断到表型和表观基因组。
JAMA Neurol. 2013 Jun;70(6):719-26. doi: 10.1001/jamaneurol.2013.275.
PLoS Genet. 2012;8(4):e1002639. doi: 10.1371/journal.pgen.1002639. Epub 2012 Apr 19.
4
Alzheimer disease susceptibility loci: evidence for a protein network under natural selection.阿尔茨海默病易感性基因座:自然选择下的蛋白质网络证据。
Am J Hum Genet. 2012 Apr 6;90(4):720-6. doi: 10.1016/j.ajhg.2012.02.022.
5
Genetics of gene expression in primary immune cells identifies cell type-specific master regulators and roles of HLA alleles.原发性免疫细胞中基因表达的遗传学研究鉴定出了细胞类型特异性的主调控因子和 HLA 等位基因的作用。
Nat Genet. 2012 Mar 25;44(5):502-10. doi: 10.1038/ng.2205.
6
Statistical colocalization of monocyte gene expression and genetic risk variants for type 1 diabetes.单核细胞基因表达与 1 型糖尿病遗传风险变异的统计共定位。
Hum Mol Genet. 2012 Jun 15;21(12):2815-24. doi: 10.1093/hmg/dds098. Epub 2012 Mar 8.
7
A 17q12 allele is associated with altered NK cell subsets and function.一个 17q12 等位基因与 NK 细胞亚群和功能的改变有关。
J Immunol. 2012 Apr 1;188(7):3315-22. doi: 10.4049/jimmunol.1102775. Epub 2012 Feb 15.
8
A genome-wide association study identified AFF1 as a susceptibility locus for systemic lupus eyrthematosus in Japanese.一项全基因组关联研究发现 AFF1 是日本系统性红斑狼疮的易感基因位点。
PLoS Genet. 2012 Jan;8(1):e1002455. doi: 10.1371/journal.pgen.1002455. Epub 2012 Jan 26.
9
Genome-wide meta-analysis identifies novel multiple sclerosis susceptibility loci.全基因组荟萃分析确定新的多发性硬化症易感基因座。
Ann Neurol. 2011 Dec;70(6):897-912. doi: 10.1002/ana.22609.
10
Genetic control of gene expression in whole blood and lymphoblastoid cell lines is largely independent.全血和淋巴母细胞系中基因表达的遗传控制在很大程度上是独立的。
Genome Res. 2012 Mar;22(3):456-66. doi: 10.1101/gr.126540.111. Epub 2011 Dec 19.