Choi E, Lee G, Park J, Lee T K, Choi H S, Lee S
Department of Genetic Engineering, Sungkyunkwan University, Suwon, 440-746, Korea.
Acta Virol. 2012;56(3):187-98. doi: 10.4149/av_2012_03_187.
Sweet potato leaf curl disease (SPLCD) was primarily identified in sweet potato fields in Korea in 2003, and the complete genomic sequence of sweet potato leaf curl virus (SPLCV) has been cloned. The genome of the Korean SPLCV isolate (SPLCV-KR) comprises 2,828 nucleotides with six open reading frames in DNA-A, similar to a monopartite begomovirus. Additionally, neither the genome B genomic component nor the DNA beta sequence was detected. The results of phylogenetic analysis using the maximum parsimony method showed that SPLCV-KR is more closely related to SPLCV-US (US) than SPLCV-CN (China) and SPLCV-JP (Japan). A tandem repeat dimer of SPLCV-KR was cloned and found to be infectious in sweet potatoes (Ipomoea batatas) via biolistic inoculation. The SPLCV-infected sweet potatoes exhibited mild leaf curl symptoms of SPLCD, and the newly-replicated viral DNA was detected via Southern blot analysis. Results of biotic, molecular, and phylogenetic characterization suggest that SPLCV-KR is a new strain of SPLCV and is importantly placed in the evolutionary progression from curtoviruses to begomoviruses.
sweet potato leaf curl virus; sweet potato leaf curl disease; phylogenetic analysis; infectious clone; biolistic infection.
甘薯卷叶病(SPLCD)于2003年在韩国的甘薯田中首次被发现,并且甘薯卷叶病毒(SPLCV)的完整基因组序列已被克隆。韩国SPLCV分离株(SPLCV-KR)的基因组由2828个核苷酸组成,在DNA-A中有六个开放阅读框,类似于单分体双生病毒。此外,未检测到基因组B基因组组分或DNAβ序列。使用最大简约法进行的系统发育分析结果表明,SPLCV-KR与SPLCV-US(美国)的亲缘关系比与SPLCV-CN(中国)和SPLCV-JP(日本)更近。克隆了SPLCV-KR的串联重复二聚体,并发现通过基因枪接种在甘薯(Ipomoea batatas)中具有感染性。受SPLCV感染的甘薯表现出SPLCD的轻度卷叶症状,并且通过Southern印迹分析检测到新复制的病毒DNA。生物、分子和系统发育特征的结果表明,SPLCV-KR是SPLCV的一个新菌株,并且在从曲顶病毒到双生病毒的进化进程中具有重要地位。
甘薯卷叶病毒;甘薯卷叶病;系统发育分析;感染性克隆;基因枪感染