Gomez-Escribano Juan Pablo, Bibb Mervyn J
Department of Molecular Microbiology, John Innes Centre, Norwich, United Kingdom.
Methods Enzymol. 2012;517:279-300. doi: 10.1016/B978-0-12-404634-4.00014-0.
The expression of a gene or a set of genes from one organism in a different species is known as "heterologous expression." In actinomycetes, prolific producers of natural products, heterologous gene expression has been used to confirm the clustering of secondary metabolite biosynthetic genes, to analyze natural product biosynthesis, to produce variants of natural products by genetic engineering, and to discover new compounds by screening genomic libraries. Recent advances in DNA sequencing have enabled the rapid and affordable sequencing of actinomycete genomes and revealed a large number of secondary metabolite gene clusters with no known products. Heterologous expression of these cryptic gene clusters combined with comparative metabolic profiling provides an important means to identify potentially novel compounds. In this chapter, the methods and strategies used to heterologously express actinomycete gene clusters, including the techniques used for cloning secondary metabolite gene clusters, the Streptomyces hosts used for their expression, and the techniques employed to analyze their products by metabolic profiling, are described.
一个生物体的一个基因或一组基因在另一个物种中的表达被称为“异源表达”。在天然产物的丰富生产者放线菌中,异源基因表达已被用于确认次级代谢物生物合成基因的聚类、分析天然产物生物合成、通过基因工程生产天然产物变体以及通过筛选基因组文库发现新化合物。DNA测序的最新进展使得放线菌基因组能够快速且经济地进行测序,并揭示了大量没有已知产物的次级代谢物基因簇。这些隐秘基因簇的异源表达与比较代谢谱分析相结合,为鉴定潜在的新化合物提供了重要手段。在本章中,将描述用于异源表达放线菌基因簇的方法和策略,包括用于克隆次级代谢物基因簇的技术、用于其表达的链霉菌宿主以及通过代谢谱分析来分析其产物所采用的技术。