Centre for Molecular and Structural Biochemistry, School of Chemistry, University of East Anglia, Norwich NR4 7TJ, UK.
Biochem Soc Trans. 2012 Dec 1;40(6):1534-8. doi: 10.1042/BST20120198.
Defining structural features of IDPs (intrinsically disordered proteins) and relating these to biological function requires characterization of their dynamical properties. In the present paper, we review what is known about the IDPs of colicins, protein antibiotics that use their IDPs to enter bacterial cells. The structurally characterized colicin IDPs we consider contain linear binding epitopes for proteins within their target cells that the colicin hijacks during entry. We show that these binding epitopes take part in intramolecular interactions in the absence of protein partners, i.e. self-recognition, and consider the structural origins of this and its functional implications. We suggest that self-recognition is common in other IDPs that contain similar types of binding epitopes.
定义 IDP(无规卷曲蛋白质)的结构特征,并将这些特征与生物功能联系起来,需要对其动态特性进行描述。在本文中,我们回顾了有关大肠杆菌素(一种利用其 IDP 进入细菌细胞的蛋白质抗生素)的 IDP 的已知信息。我们考虑的结构特征明确的大肠杆菌素 IDP 包含线性结合表位,这些表位针对靶细胞中的蛋白质,大肠杆菌素在进入时劫持这些蛋白质。我们表明,这些结合表位在没有蛋白质伴侣的情况下参与分子内相互作用,即自我识别,并考虑了这种现象的结构起源及其功能意义。我们认为,自我识别在其他含有类似结合表位的 IDP 中很常见。