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大肠杆菌磷酸果糖激酶-2 在冷和热变性时的展开单体中间体。

Expanded monomeric intermediate upon cold and heat unfolding of phosphofructokinase-2 from Escherichia coli.

机构信息

Departamento de Bioquímica y Biología Molecular, Facultad de Ciencias Químicas y Farmacéuticas, Universidad de Chile, Santiago, Chile.

出版信息

Biophys J. 2012 Nov 21;103(10):2187-94. doi: 10.1016/j.bpj.2012.09.043. Epub 2012 Nov 20.

Abstract

Folding studies have been focused mainly on small, single-domain proteins or isolated single domains of larger proteins. However, most of the proteins present in biological systems are composed of multiple domains, and to date, the principles that underlie its folding remain elusive. The unfolding of Pfk-2 induced by GdnHCl has been described by highly cooperative three-state equilibrium (N(2)↔2I↔2U). This is characterized by a strong coupling between the subunits' tertiary structure and the integrity of the dimer interface because "I" represents an unstructured and expanded monomeric intermediate. Here we report that cold and heat unfolding of Pfk-2 resembles the N(2)↔2I step of chemically induced unfolding. Moreover, cold unfolding appears to be as cooperative as that induced chemically and even more so than its heat-unfolding counterpart. Because Pfk-2 is a large homodimer of 66 kDa with a complex topology consisting of well-defined domains, these results are somewhat unexpected considering that cold unfolding has been described as a special kind of perturbation that decouples the cooperative unfolding of several proteins.

摘要

折叠研究主要集中在小的、单结构域的蛋白质或较大蛋白质的孤立单结构域上。然而,生物系统中存在的大多数蛋白质由多个结构域组成,迄今为止,其折叠的基本原理仍难以捉摸。 Pfk-2 的去折叠由 GdnHCl 诱导,具有高度协同的三态平衡(N(2)↔2I↔2U)。这一特征表现为亚基三级结构与二聚体界面完整性之间的强耦合,因为“I”代表无结构和扩展的单体中间态。在这里,我们报告 Pfk-2 的冷和热去折叠类似于化学诱导去折叠的 N(2)↔2I 步骤。此外,冷去折叠的协同性与化学诱导的去折叠一样强,甚至比其热去折叠的对应物更强。由于 Pfk-2 是一个 66 kDa 的大同源二聚体,具有由明确定义的结构域组成的复杂拓扑结构,这些结果有些出人意料,因为冷去折叠已被描述为一种特殊的扰动,它可以使几个蛋白质的协同去折叠解耦。

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