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本文引用的文献

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Does positive selection drive transcription factor binding site turnover? A test with Drosophila cis-regulatory modules.正选择是否驱动转录因子结合位点的更替?利用果蝇顺式调控模块进行的检验。
PLoS Genet. 2011 Apr;7(4):e1002053. doi: 10.1371/journal.pgen.1002053. Epub 2011 Apr 28.
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Mapping and analysis of chromatin state dynamics in nine human cell types.绘制和分析九种人类细胞类型中的染色质状态动态。
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Classic selective sweeps were rare in recent human evolution.经典的选择清除在人类近期进化中较为罕见。
Science. 2011 Feb 18;331(6019):920-4. doi: 10.1126/science.1198878.
4
The -14010*C variant associated with lactase persistence is located between an Oct-1 and HNF1α binding site and increases lactase promoter activity.与乳糖持续存在相关的-14010*C 变体位于 Oct-1 和 HNF1α 结合位点之间,增加了乳糖酶启动子活性。
Hum Genet. 2011 Oct;130(4):483-93. doi: 10.1007/s00439-011-0966-0. Epub 2011 Feb 15.
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Serum bilirubin and risk of respiratory disease and death.血清胆红素与呼吸疾病和死亡风险。
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Prevalence of clinically relevant UGT1A alleles and haplotypes in African populations.非洲人群中临床相关UGT1A等位基因和单倍型的流行情况。
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Variation in the ADH1B proximal promoter affects expression.ADH1B 近端启动子的变异影响表达。
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Coordinated genome-wide modifications within proximal promoter cis-regulatory elements during vertebrate evolution.脊椎动物进化过程中近端启动子顺式调控元件内全基因组协调修饰。
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顺式作用多态性对人类表型的影响。

The impact of cis-acting polymorphisms on the human phenotype.

作者信息

Jones Bryony L, Swallow Dallas M

机构信息

Research Department of Genetics, Evolution and Environment, University College London, Darwin Building, Gower Street, London, WC1E 6BT UK.

出版信息

Hugo J. 2011 Dec;5(1-4):13-23. doi: 10.1007/s11568-011-9155-4. Epub 2011 Jul 20.

DOI:10.1007/s11568-011-9155-4
PMID:23205161
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3238023/
Abstract

Cis-acting polymorphisms that affect gene expression are now known to be frequent, although the extent and mechanisms by which such variation affects the human phenotype are, as yet, only poorly understood. Key signatures of cis-acting variation are differences in gene expression that are tightly associated with regulatory SNPs or expression Quantitative Trait Loci (eQTL) and an imbalance of allelic expression (AEI) in heterozygous samples. Such cis-acting sequence differences appear often to have been under selection within and between populations and are also thought to be important in speciation. Here we describe the example of lactase persistence. In medical research, variants that affect regulation in cis have been implicated in both monogenic and polygenic disorders, and in the metabolism of drugs. In this review we suggest that by further understanding common regulatory variations and how they interact with other genetic and environmental variables it will be possible to gain insight into important mechanisms behind complex disease, with the potential to lead to new methods of diagnosis and treatments.

摘要

现在已知影响基因表达的顺式作用多态性很常见,尽管这种变异影响人类表型的程度和机制目前仍知之甚少。顺式作用变异的关键特征是与调控单核苷酸多态性(SNP)或表达数量性状基因座(eQTL)紧密相关的基因表达差异,以及杂合样本中等位基因表达(AEI)的不平衡。这种顺式作用序列差异似乎常常在群体内部和群体之间受到选择,并且也被认为在物种形成中很重要。在这里,我们描述乳糖酶持续性的例子。在医学研究中,影响顺式调控的变异已被证明与单基因和多基因疾病以及药物代谢有关。在这篇综述中,我们认为,通过进一步了解常见的调控变异以及它们如何与其他遗传和环境变量相互作用,将有可能深入了解复杂疾病背后的重要机制,从而有可能带来新的诊断和治疗方法。