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中国麝鼩(Neotetracus sinensis)线粒体全基因组序列

The complete mitochondrial genome sequence of Shrew Gymnure, Neotetracus sinensis.

作者信息

Lu Lu, Tu Feiyun, Yan Chaochao, Zhang Xiuyue, Yue Bisong, Zeng Tao

机构信息

Sichuan Key Laboratory of Conservation Biology on Endangered Wildlife, College of Life Sciences, Sichuan University, Chengdu 610064, PR China.

出版信息

Mitochondrial DNA. 2013 Jun;24(3):179-82. doi: 10.3109/19401736.2012.744976. Epub 2012 Dec 3.

Abstract

The Shrew Gymnure Neotetracus sinensis belongs to family Erinaceidae, and distributes in China, Myanmar, and northern Vietnam. In this study, the whole mitochondrial genome of N. sinensis was first sequenced and characterized. The genome is 16,982 bases in length. Bayesian inference and maximum likelihood methods were used to construct phylogenetic trees based on 12 concatenated protein-coding genes on the heavy strand. Phylogenetic analyses further confirm the subfamily Galericinae diverged prior to the subfamily Erinaceinae, support the species N. sinensis was in distinct genus Neotetracus rather than Hylomys, and N. sinensis diverged later than Echinosorex gymnura.

摘要

中麝鼩(Neotetracus sinensis)属于猬科,分布于中国、缅甸和越南北部。在本研究中,首次对中麝鼩的完整线粒体基因组进行了测序和特征分析。该基因组长度为16,982个碱基。基于重链上12个串联的蛋白质编码基因,采用贝叶斯推断和最大似然法构建系统发育树。系统发育分析进一步证实,林猬亚科在刺猬亚科之前分化,支持中麝鼩属于独特的麝鼩属而非麝鼩属,且中麝鼩的分化晚于针毛鼠猬。

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