Evolution, Ecology and Genetics, School of Biology, The Australian National University, Building 116 Daley Road, Canberra, ACT 0200, Australia.
Am J Bot. 2012 Dec;99(12):2045-57. doi: 10.3732/ajb.1200327. Epub 2012 Dec 5.
The glacial cycles of the Quaternary did not impact Australia in the same way as Europe and North America. Here we investigate the history of population isolation, species differentiation, and hybridization in the southeastern Australian landscape, using five species of Lomatia (Proteaceae). We use a chloroplast DNA phylogeography to assess chloroplast haplotype (chlorotype) sharing among these species and whether species with shared distributions have been affected by shared biogeographic barriers. •
We used six chloroplast DNA simple sequence repeats (cpSSR) across five species of Lomatia, sampled across their entire distributional range in southeastern Australia. Resulting size data were combined, presented as a network, and visualized on a map. Biogeographical barriers were tested using AMOVA. To explore hypotheses of chlorotype origin, we converted the network into a cladogram and reconciled with all possible species trees using parsimony-based tree mapping. •
Some chlorotypes were shared across multiple species of Lomatia in the study, including between morphologically differentiated species. Chlorotypes were either widespread in distribution or geographically restricted to specific regions. Biogeographical structure was identified across the range of Lomatia. The most parsimonious reconciled tree incorporated horizontal transfer of chlorotypes. •
Lomatia shows evidence of both incomplete lineage sorting and extensive hybridization between co-occurring species. Although the species in the study appear to have responded to a number of biogeographic barriers to varying degrees, our findings identified the Hunter River Valley as the most important long-term biogeographic barrier for the genus in southeastern Australia.
第四纪的冰川周期并没有像欧洲和北美洲那样对澳大利亚产生同样的影响。在这里,我们利用五种 Lomatia 属(山龙眼科)来研究东南澳大利亚景观中的种群隔离、物种分化和杂交的历史。我们使用叶绿体 DNA 系统地理学来评估这些物种之间的叶绿体单倍型(chlorotype)共享情况,以及是否具有共享分布的物种受到共享生物地理障碍的影响。
我们在东南澳大利亚的整个分布范围内,对五种 Lomatia 属的物种使用了六个叶绿体 DNA 简单序列重复(cpSSR)。将得到的大小数据组合在一起,呈现为网络图,并在地图上可视化。使用 AMOVA 测试生物地理障碍。为了探索 chlorotype 起源的假说,我们将网络转换为一个系统发育树,并使用基于简约的树映射与所有可能的物种树进行协调。
在本研究中,一些 chlorotype 在多种 Lomatia 属的物种中共享,包括形态分化的物种之间。chlorotype 的分布要么广泛,要么局限于特定的区域。在 Lomatia 的分布范围内确定了生物地理结构。最简约的协调树包含了 chlorotype 的水平转移。
Lomatia 表现出不完全谱系分选和广泛杂交的证据,存在于共存物种之间。尽管研究中的物种似乎对多种生物地理障碍有不同程度的反应,但我们的研究结果确定了亨特河谷是该属在东南澳大利亚最重要的长期生物地理障碍。