Agatonovic-Kustrin Suezana, Morton David W, Celebic D
School of Pharmacy and Applied Science, La Trobe Institute of Molecular Sciences, Faculty of Science, Technology and Engineering, La Trobe University, Bendigo, P.O. Box 199, Bendigo 3552, Australia.
Comb Chem High Throughput Screen. 2013 Mar;16(3):223-32. doi: 10.2174/1386207311316030007.
The aim of this study was to develop an in silico Quantitative Structure Activity Relationship (QSAR) model capable of predicting partitioning of pesticides into breast milk from their respective chemical structures. A large data set of 190 diverse compounds, including drugs and their active metabolites (87%), and pesticides (13%) with experimentally derived milk/plasma (M/P) ratios taken from the literature, was used to train, test and validate a predictive model. Each compound was encoded with 65 calculated chemical structure descriptors. Sensitivity analysis was then used to select a subset of the descriptors that best describe the transfer of pesticides into breast milk and Artificial neural networks modeling was applied to correlate selected descriptors (inputs) with the M/P ratio (output) in order to develop a predictive QSAR. The developed QSAR model included 26 molecular descriptors related to the molecular size, polarity and hydrogen binding capacity. Together with aromatic rings, these descriptors account for molecule's size and hydrophobic interaction capabilities. The average correlation for the final model (incorporating training, testing, and validation) was 0.85. The developed model provides a useful method for predicting the M/P ratios of pesticides from just a sketch of their respective molecular structures. However, these predictions should only be used to assist in the evaluation of risk in conjunction with an assessment of the infant's response to a given drug/pesticide.
本研究的目的是开发一种计算机辅助定量构效关系(QSAR)模型,该模型能够根据农药各自的化学结构预测其在母乳中的分配情况。使用一个包含190种不同化合物的大型数据集来训练、测试和验证一个预测模型,这些化合物包括药物及其活性代谢物(87%)和农药(13%),其母乳/血浆(M/P)比率是从文献中获取的实验数据。每种化合物都用65个计算得出的化学结构描述符进行编码。然后通过敏感性分析选择最能描述农药向母乳中转移的描述符子集,并应用人工神经网络建模将所选描述符(输入)与M/P比率(输出)相关联,以开发一个预测性QSAR模型。所开发的QSAR模型包括26个与分子大小、极性和氢键结合能力相关的分子描述符。这些描述符与芳香环一起,决定了分子的大小和疏水相互作用能力。最终模型(包括训练、测试和验证)的平均相关性为0.85。所开发的模型提供了一种有用的方法,仅从农药各自的分子结构草图就能预测其M/P比率。然而,这些预测仅应用于结合对婴儿对特定药物/农药反应的评估来协助风险评估。