School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo, 192-0392, Japan.
Extremophiles. 2013 Jan;17(1):171-9. doi: 10.1007/s00792-012-0506-4. Epub 2012 Dec 14.
Orthologs of Escherichia coli ygjD and yeaZ genes are highly conserved in various organisms. The genome of the radioresistant bacterium Deinococcus radiodurans possesses single orthologs of ygjD (DR_0382) and yeaZ (DR_0756). Complete loss of either one or both genes did not result in any significant changes in cell growth efficiency, indicating that both genes are not essential for cell viability in D. radiodurans, unlike the case with other species such as E. coli, Bacillus subtilis and Saccharomyces cerevisiae. Survival rates following DNA damage induced by hydrogen peroxide (H(2)O(2)), N-methyl-N'-nitro-N-nitrosoguanidine (MNNG), ultra violet (UV) radiation, γ-rays, cisplatin and mitomycin C (MMC) were compared among the wild-type strain and D. radiodurans ygjD/yeaZ null mutants. Cell viability of the null mutants did not decrease following exposure to H(2)O(2) or MNNG. In addition, the reduction in cell viability following exposure to γ-rays, UV radiation or cisplatin was marginal in the null mutants compared to the wild-type strain. Interestingly, the null mutants exhibited high sensitivity to MMC, which mainly causes interstrand DNA cross-links. The sensitivity of the null mutants to MMC was restored to that of the wild type by transformation with plasmids expressing these genes. These results suggest that D. radiodurans ygjD and yeaZ genes are involved in DNA repair and play a role in the repair of DNA cross-links.
大肠杆菌 ygjD 和 yeaZ 基因的同源物在各种生物中高度保守。耐辐射球菌的基因组仅拥有 ygjD(DR_0382)和 yeaZ(DR_0756)的单一同源物。缺失其中一个或两个基因都不会导致细胞生长效率发生显著变化,这表明与其他物种(如大肠杆菌、枯草芽孢杆菌和酿酒酵母)不同,这两个基因对于耐辐射球菌的细胞活力并非必需。在用过氧化氢(H 2 O 2 )、N-甲基-N'-硝基-N-亚硝基胍(MNNG)、紫外线(UV)辐射、γ射线、顺铂和丝裂霉素 C(MMC)诱导 DNA 损伤后,比较了野生型菌株和耐辐射球菌 ygjD/yeaZ 缺失突变体的存活率。在暴露于 H 2 O 2 或 MNNG 后,缺失突变体的细胞活力没有下降。此外,与野生型菌株相比,缺失突变体在暴露于 γ射线、UV 辐射或顺铂后细胞活力的下降幅度较小。有趣的是,缺失突变体对主要引起链间 DNA 交联的 MMC 表现出高敏感性。通过表达这些基因的质粒转化,缺失突变体对 MMC 的敏感性恢复到野生型水平。这些结果表明,耐辐射球菌 ygjD 和 yeaZ 基因参与 DNA 修复,并在修复 DNA 交联中发挥作用。