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达氏柄杆菌新种,一种从富营养化水库中分离得到的具有柄的细菌。

Caulobacter daechungensis sp. nov., a stalked bacterium isolated from a eutrophic reservoir.

机构信息

Environmental Biotechnology Research Center, Korea Research Institute of Bioscience & Biotechnology, 125 Gwahak-ro, Yuseong-gu, Daejeon 305-806, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2013 Jul;63(Pt 7):2559-2564. doi: 10.1099/ijs.0.048884-0. Epub 2012 Dec 14.

Abstract

A Gram-stain-negative, aerobic, non-spore-forming, curved, rod-shaped bacterium, H-E3-2(T), was isolated from a water sample taken from Daechung Reservoir, Republic of Korea, during the late-blooming period of cyanobacteria. Strain H-E3-2(T) was motile with a single polar flagellum or non-motile (stalked cell). Comparative 16S rRNA gene sequence studies showed the isolate had a clear affiliation with the class Alphaproteobacteria and was most closely related to Caulobacter fusiformis ATCC 15257(T) and Caulobacter mirabilis LMG 24261(T), showing 97.6 and 97.3 % 16S rRNA gene sequence similarity, respectively, and 95.3-96.3 % similarity to all other species of the genus Caulobacter. The predominant ubiquinone was Q-10. The major fatty acids were summed feature 8 (C18 : 1ω6c and/or C18 : 1ω7c) and C16 : 0. The G+C content of the genomic DNA of strain H-E3-2(T) was 64.7 mol%. DNA-DNA hybridization values of strain H-E3-2(T) with C. fusiformis ATCC 15257(T) and C. mirabilis LMG 24261(T) were 21.2 and 19.7 %, respectively. Thus, based on the results of polyphasic analysis, it is proposed that strain H-E3-2(T) represents a novel species of the genus Caulobacter, for which the name Caulobacter daechungensis sp. nov. is proposed. The type strain is H-E3-2(T) ( = KCTC 32211(T) = JCM 18689(T)).

摘要

一株革兰氏阴性、需氧、不产芽孢、弯曲的杆状细菌 H-E3-2(T),是从韩国大邱水库的一个水样中分离得到的,该水样取自蓝藻晚花期。菌株 H-E3-2(T)可运动,有一个单极鞭毛或不运动(柄细胞)。比较 16S rRNA 基因序列研究表明,该分离物与α变形菌纲有明确的亲缘关系,与丛毛单胞菌属的丛毛单胞菌 ATCC 15257(T)和弯曲假单胞菌 LMG 24261(T)最为密切相关,分别显示出 97.6%和 97.3%的 16S rRNA 基因序列相似性,与所有其他丛毛单胞菌属的种的相似性为 95.3-96.3%。主要的醌是 Q-10。主要脂肪酸为总和特征 8(C18:1ω6c 和/或 C18:1ω7c)和 C16:0。菌株 H-E3-2(T)的基因组 DNA 的 G+C 含量为 64.7mol%。菌株 H-E3-2(T)与丛毛单胞菌属的丛毛单胞菌 ATCC 15257(T)和弯曲假单胞菌 LMG 24261(T)的 DNA-DNA 杂交值分别为 21.2%和 19.7%。因此,根据多相分析的结果,建议菌株 H-E3-2(T)代表丛毛单胞菌属的一个新种,命名为大邱丛毛单胞菌。模式菌株为 H-E3-2(T)(=KCTC 32211(T)=JCM 18689(T))。

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