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利用定制设计的转录激活因子样效应物核酸酶在青鳉中进行高效靶向诱变。

Efficient targeted mutagenesis in medaka using custom-designed transcription activator-like effector nucleases.

机构信息

Division of Applied Bioscience, Graduate School of Agriculture Kyoto University, Sakyo-ku, Kyoto, Japan.

出版信息

Genetics. 2013 Mar;193(3):739-49. doi: 10.1534/genetics.112.147645. Epub 2013 Jan 3.

DOI:10.1534/genetics.112.147645
PMID:23288935
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3583995/
Abstract

Transcription activator-like effector nucleases (TALENs) have become powerful tools for targeted genome editing. Here we demonstrate efficient targeted mutagenesis in medaka (Oryzias latipes), which serves as an excellent vertebrate model for genetics and genomics. We designed and constructed a pair of TALENs targeting the medaka DJ-1 gene, a homolog of human DJ-1 (PARK7). These TALENs induced a number of insertions and deletions in the injected embryos with extremely high efficiency. This induction of mutations occurred in a dose-dependent manner. All screened G0 fish injected with the TALENs transmitted the TALEN-induced mutations to the next generation with high efficiency (44-100%). We also confirmed that these TALENs induced site-specific mutations because none of the mutations were found at potential off-target sites. In addition, the DJ-1 protein was lost in DJ-1(Δ7/Δ7) fish that carried a TALEN-induced frameshift mutation in both alleles. We also investigated the effect of the N- and C-terminal regions of the transcription activator-like (TAL) effector domain on the gene-disrupting activity of DJ1-TALENs and found that 287 amino acids at the N terminus and 63 amino acids at the C terminus of the TAL domain exhibited the highest disrupting activity in the injected embryos. Our results suggest that TALENs enable us to rapidly and efficiently establish knockout medaka strains. This is the first report of targeted mutagenesis in medaka using TALENs. The TALEN technology will expand the potential of medaka as a model system for genetics and genomics.

摘要

转录激活子样效应物核酸酶(TALENs)已成为靶向基因组编辑的有力工具。在这里,我们展示了在斑马鱼(Oryzias latipes)中高效的靶向诱变,斑马鱼是遗传和基因组学的优秀脊椎动物模型。我们设计并构建了一对靶向斑马鱼 DJ-1 基因的 TALENs,DJ-1 基因是人类 DJ-1(PARK7)的同源基因。这些 TALENs 在注射的胚胎中以极高的效率诱导了许多插入和缺失。这种突变的诱导是剂量依赖性的。所有用 TALENs 注射的筛选出的 G0 鱼都以高效率(44-100%)将 TALEN 诱导的突变传递给下一代。我们还证实这些 TALENs 诱导了特异性突变,因为在潜在的脱靶位点没有发现任何突变。此外,携带两个等位基因中 TALEN 诱导的移码突变的 DJ-1(Δ7/Δ7)鱼中失去了 DJ-1 蛋白。我们还研究了转录激活样(TAL)效应结构域的 N 端和 C 端区域对 DJ1-TALENs 基因破坏活性的影响,发现 TAL 结构域的 N 端的 287 个氨基酸和 C 端的 63 个氨基酸在注射的胚胎中表现出最高的破坏活性。我们的结果表明,TALENs 使我们能够快速有效地建立敲除斑马鱼品系。这是首次使用 TALENs 在斑马鱼中进行靶向诱变的报道。TALEN 技术将扩展斑马鱼作为遗传和基因组学模型系统的潜力。

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TAL Effector-Nucleotide Targeter (TALE-NT) 2.0: tools for TAL effector design and target prediction.TAL 效应物-核苷酸靶向器(TALE-NT)2.0:TAL 效应物设计和靶标预测工具。
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Dev Growth Differ. 2012 Jun;54(5):546-56. doi: 10.1111/j.1440-169X.2012.01357.x. Epub 2012 May 30.
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