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本文引用的文献

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Biomol Concepts. 2012 Oct;3(5):403-14. doi: 10.1515/bmc-2012-0016.
2
FMRP targets distinct mRNA sequence elements to regulate protein expression.FMRP 靶向不同的 mRNA 序列元件来调节蛋白质表达。
Nature. 2012 Dec 20;492(7429):382-6. doi: 10.1038/nature11737. Epub 2012 Dec 12.
3
RIP-chip enrichment analysis.RIP-chip 富集分析。
Bioinformatics. 2013 Jan 1;29(1):77-83. doi: 10.1093/bioinformatics/bts631. Epub 2012 Oct 26.
4
RIP-chip-SRM--a new combinatorial large-scale approach identifies a set of translationally regulated bantam/miR-58 targets in C. elegans.RIP-chip-SRM——一种新的组合式大规模方法,鉴定了一组在秀丽隐杆线虫中受翻译调控的 bantam/miR-58 靶基因。
Genome Res. 2012 Jul;22(7):1360-71. doi: 10.1101/gr.133330.111. Epub 2012 Mar 27.
5
HuR protein attenuates miRNA-mediated repression by promoting miRISC dissociation from the target RNA.HuR 蛋白通过促进 miRISC 与靶 RNA 解离来减弱 miRNA 介导的抑制作用。
Nucleic Acids Res. 2012 Jun;40(11):5088-100. doi: 10.1093/nar/gks148. Epub 2012 Feb 23.
6
Genome-wide studies of mRNA synthesis and degradation in eukaryotes.真核生物中mRNA合成与降解的全基因组研究。
Biochim Biophys Acta. 2012 Jun;1819(6):604-15. doi: 10.1016/j.bbagrm.2011.12.002. Epub 2011 Dec 11.
7
Neuron-specific ELAV/Hu proteins suppress HuR mRNA during neuronal differentiation by alternative polyadenylation.神经元特异性 ELAV/Hu 蛋白通过可变多聚腺苷酸化在神经元分化过程中抑制 HuR mRNA。
Nucleic Acids Res. 2012 Mar;40(6):2734-46. doi: 10.1093/nar/gkr1114. Epub 2011 Dec 1.
8
The mRNA stability factor HuR inhibits microRNA-16 targeting of COX-2.mRNA 稳定性因子 HuR 抑制 COX-2 的 microRNA-16 靶向作用。
Mol Cancer Res. 2012 Jan;10(1):167-80. doi: 10.1158/1541-7786.MCR-11-0337. Epub 2011 Nov 2.
9
The RNA-binding protein HuR opposes the repression of ERBB-2 gene expression by microRNA miR-331-3p in prostate cancer cells.RNA 结合蛋白 HuR 拮抗 microRNA miR-331-3p 对前列腺癌细胞中 ERBB-2 基因表达的抑制作用。
J Biol Chem. 2011 Dec 2;286(48):41442-41454. doi: 10.1074/jbc.M111.301481. Epub 2011 Oct 4.
10
Posttranscriptional control and the role of RNA-binding proteins in gene regulation in trypanosomatid protozoan parasites.转录后调控和 RNA 结合蛋白在原生动物鞭毛虫寄生虫基因调控中的作用。
Wiley Interdiscip Rev RNA. 2010 Jul-Aug;1(1):34-46. doi: 10.1002/wrna.6. Epub 2010 May 6.

协调 ELAV/Hu mRNA 调控物的机制。

Mechanisms coordinating ELAV/Hu mRNA regulons.

机构信息

Department of Molecular Genetics & Microbiology, Duke University Medical Center, Durham, NC 27710, United States.

出版信息

Curr Opin Genet Dev. 2013 Feb;23(1):35-43. doi: 10.1016/j.gde.2012.12.006. Epub 2013 Jan 9.

DOI:10.1016/j.gde.2012.12.006
PMID:23312841
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3617084/
Abstract

The 5' and 3' untranslated regions (UTRs) of messenger RNAs (mRNAs) function as platforms that can determine the fate of each mRNA individually and in aggregate. Multiple mRNAs that encode proteins that are functionally related often interact with RNA-binding proteins (RBPs) and noncoding RNAs (ncRNAs) that coordinate their expression in time and space as RNA regulons within the ribonucleoprotein (RNP) infrastructure we term the ribonome. Recent ribonomic methods have emerged that can determine which mRNAs are bound and regulated by RBPs and ncRNAs, some of which act in combination to determine global outcomes. ELAV/Hu proteins bind to AU-rich elements (ARE) in mRNAs and regulate their stability from splicing to translation, and the ubiquitous HuR protein has been implicated in cancerous cell growth. Recent work is focused on mechanistic models of how ELAV/Hu proteins increase mRNA stability and translation by repressing microRNAs (miRs) and the RNA induced silencing complex (RISC) via ARE-based ribonucleosomes that may affect global functions of mRNA regulons.

摘要

信使 RNA(mRNA)的 5' 和 3' 非翻译区(UTRs)作为平台,可以单独和总体上决定每个 mRNA 的命运。编码功能相关蛋白质的多个 mRNA 经常与 RNA 结合蛋白(RBPs)和非编码 RNA(ncRNAs)相互作用,作为核糖核蛋白(RNP)基础设施内的 RNA 调控子,在时间和空间上协调它们的表达,我们称之为核糖组。最近出现了核糖组学方法,可以确定哪些 mRNA 被 RBPs 和 ncRNAs 结合和调节,其中一些组合作用以确定全局结果。ELAV/Hu 蛋白与 mRNA 中的富含 AU 元件(ARE)结合,并调节它们从剪接到翻译的稳定性,而普遍存在的 HuR 蛋白与癌细胞生长有关。最近的工作集中在 ELAV/Hu 蛋白通过基于 ARE 的核小体抑制 microRNAs(miRs)和 RNA 诱导沉默复合物(RISC)来增加 mRNA 稳定性和翻译的机制模型上,这可能会影响 mRNA 调控子的全局功能。