BI Verkin Institute for Low Temperature Physics and Engineering, National Academy of Sciences of Ukraine, 47 Lenin Avenue, Kharkov 61103, Ukraine.
Int J Biol Macromol. 2013 Apr;55:137-41. doi: 10.1016/j.ijbiomac.2013.01.001. Epub 2013 Jan 8.
Dependence of DNA metallization degree during B-DNA transition into the metallized (m) form on DNA concentration has been studied by visible and differential UV-spectroscopy in the presence of Zn(2+), Co(2+) and Ni(2+) ions in tetraborate buffer (pH 8.5) with and without ethidium bromide. Constants of Mt(2+) binding to double stranded DNA were calculated. The obtained binding constants corresponded to the formation of inter-strand metal bridges stabilizing m-form. Thermodynamic origin of higher efficiency of Zn(2+) ions in DNA metallization compared to Co(2+) and Ni(2+) was revealed. Increase of the DNA helix-coil transition temperature by up to 10°С upon formation of m-form in the presence of Zn(2+) ions was observed and rationalized. Furthermore, a strong cooperative decrease (up to 30°С) of the temperature of В→m transition induced by heating in the presence of Zn(2+) was found and its nature was explained.
在四硼酸盐缓冲液(pH 8.5)中,存在 Zn(2+)、Co(2+) 和 Ni(2+) 离子以及溴化乙锭的情况下,通过可见和差示紫外光谱研究了 B-DNA 向金属化(m)形式转变过程中 DNA 金属化程度对 DNA 浓度的依赖性。计算了 Mt(2+)与双链 DNA 的结合常数。得到的结合常数对应于形成稳定 m 形式的链间金属桥。揭示了与 Co(2+)和 Ni(2+)相比,Zn(2+)离子在 DNA 金属化中更高效率的热力学起源。观察到并解释了在 Zn(2+)离子存在下形成 m 形式时,DNA 螺旋-线圈转变温度升高了 10°C。此外,还发现并解释了在 Zn(2+)存在下加热诱导的 B→m 转变温度的强烈协同下降(高达 30°C)。